Cellulosilyticum lentocellum: Clole_0395
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Entry
Clole_0395 CDS
T01448
Name
(GenBank) viral RNA helicase 1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cle
Cellulosilyticum lentocellum
Pathway
cle03420
Nucleotide excision repair
cle03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Clole_0395
03430 Mismatch repair
Clole_0395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cle03400
]
Clole_0395
Enzymes [BR:
cle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clole_0395
DNA repair and recombination proteins [BR:
cle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clole_0395
MMR (mismatch excision repair)
Other MMR factors
Clole_0395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
Viral_helicase1
AAA_19
PhoH
UvrD_C
AAA_22
ResIII
DEAD
SLFN-g3_helicase
AAA_30
AAA_16
NACHT
CAF1
TPR_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADZ82139
UniProt:
F2JKH9
LinkDB
All DBs
Position
493388..495466
Genome browser
AA seq
692 aa
AA seq
DB search
MDINLCSNEKEYLQYVQDEIDETIEQLDELVKTRQKEIFEAHKYVVQNHTDMDAMEIFSN
NKIIANDIDNLEKRTEIKSRLERMKDNTYFGRIDFLFEGDSREDIEAYYIGLGDFTSDHL
KGTLVYDWRAPISSMYYDYEIGPASYQAPIGKMSGEITKKKQYKVKNGKLIYVLDNEIRI
ADEILQKELSHNADNRMKNIVATIQKEQNTIVRNDKARIMIVQGIAGSGKTSIALHRIAY
LLYQNRHEINANDILIISPNPIFSDYISNVLPELGEENIRQYSLEELIMAELKENIKTES
KFEQIEFLLSEEMSTSNRKKNIDYKQSQDFFWLLQQFIEEFPEKFIAFKDISLGEICFKK
EEIKNHFCNRFTGQPILSRAEDIANYLAESREGYQGVKITKTVRKQMKAKLMGMFKETEL
VSIYEQFIHWCNEERALSFVLEMNKECLAYEDVFPMIYLKYALCGYTGNNKIKHLIIDEM
QDYTKVEFEILKRLFNCKMTILGDIYQVLEPKEPNVLDTLQEVFEDAVLIRMNRTYRSTF
EIATFGKNLINQTEMIPFERHGEAPRLKGSNSYSKMLEEMVVDLKKLDLNQYTTVAIICK
TLEEAKKLYGDLSSYMETTLLTTSSTIFSSGIIITTSYLAKGLEFDVVFIPSVNERNYYT
PIDRQVLYVSCTRALHLLHIYCDETLSPILEG
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggatattaatttatgtagcaacgaaaaagaatatttacagtatgttcaagacgaaatc
gatgaaaccatagagcagctagatgaactagtgaagactagacaaaaagagatttttgaa
gctcataaatacgtggttcaaaaccatacagatatggatgccatggaaatcttctcaaat
aataaaataattgctaatgatattgataatttagagaaacgtacagaaatcaaaagtagg
ttagagcgtatgaaagataatacctattttgggcgaatagactttttatttgaaggagat
tctagagaggacatagaggcctattatattggcctaggggattttacatctgatcatctt
aagggaacactagtgtatgattggcgtgcccctattagtagcatgtattatgattatgaa
ataggacctgctagttatcaagcacctatagggaaaatgtccggagagattacaaagaaa
aaacaatataaagttaagaatgggaaattaatatatgtcttagataatgaaataagaata
gctgatgaaatcttgcaaaaagaacttagccataacgctgataatcgaatgaaaaatatt
gtggcaactattcaaaaagagcagaataccattgtgcgtaatgataaggcacgcattatg
attgtacaaggaatagctggttcagggaaaacctctatcgctctccatcgaattgcttat
ttactttatcaaaatcgccatgaaataaatgccaatgacattctaattatttcacccaat
cctattttctcagattatatttcaaatgtcttaccagaattgggagaagaaaacattcgg
cagtatagcttggaagagcttataatggctgaattaaaagagaatataaaaacagaatct
aagtttgaacaaatagaatttttgttaagcgaagaaatgagcacttctaatcgtaaaaaa
aatatagattataaacagagtcaagatttcttctggctattacagcaattcattgaagaa
ttcccagagaagttcatagctttcaaggatatttctttaggggagatttgctttaaaaag
gaagaaatcaaaaatcatttttgtaacaggttcacagggcagcctattttgagtagagct
gaggatatagccaattatttagcagaaagtagagaaggatatcaaggggtaaaaattaca
aaaaccgtaagaaaacaaatgaaggctaagcttatgggaatgtttaaagagacagagtta
gtaagtatttatgagcagtttattcattggtgcaatgaggaaagagcgttatcctttgtt
ttagaaatgaataaggaatgtttggcctatgaggatgtgtttcctatgatttatctcaaa
tatgcattatgtggctatacaggaaataataagattaagcacttaatcattgatgaaatg
caggactatacaaaagttgagtttgaaatattgaagagactatttaactgcaagatgact
attttaggagatatttatcaggtactggaaccaaaggaacctaatgtattagatacgttg
caagaggtatttgaggatgcagtgctaattagaatgaatcgaacttatcgttctactttt
gaaattgcaacctttggtaaaaatttaattaaccaaacagaaatgataccctttgaaaga
catggggaagcaccaagattgaaagggagtaactcttatagcaagatgctagaggagatg
gtagtggatttaaaaaaactagacttaaaccaatatacaacagtagccattatatgcaag
actttagaagaagcaaaaaagctttatggtgacttaagttcgtatatggaaactacttta
ttaaccaccagcagcactattttttcttcaggtatcattattactacttcctatttagca
aaaggactagagtttgatgtagtttttattccaagtgttaatgaaagaaattactataca
ccaattgataggcaagtactctatgtatcttgcacaagagcattacatttacttcatatt
tattgtgatgagacactatcacctattttagaggggtga
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