Cellulosilyticum lentocellum: Clole_0607
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Entry
Clole_0607 CDS
T01448
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cle
Cellulosilyticum lentocellum
Pathway
cle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Clole_0607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cle03019
]
Clole_0607
03009 Ribosome biogenesis [BR:
cle03009
]
Clole_0607
Enzymes [BR:
cle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Clole_0607
Messenger RNA biogenesis [BR:
cle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Clole_0607
Ribosome biogenesis [BR:
cle03009
]
Prokaryotic type
rRNA helicases
Clole_0607
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
CMS1
Cas3-like_C_2
Pantoate_ligase
Motif
Other DBs
NCBI-ProteinID:
ADZ82341
UniProt:
F2JMZ9
LinkDB
All DBs
Position
762589..764367
Genome browser
AA seq
592 aa
AA seq
DB search
MIIESILFNQLEVSEDIIRAAHDMGFEETTPIQGKAIPIILQGNDIIAQAPTGTGKTCAF
GIPAIESVDTTNEKVQVLILCPTRELVIQTTEELSALAKYKRGIRTLPIYGGQQIDRQII
ALKKRPQIIVGTPGRIMDHLRRGTLKLEHLKMIILDEADEMLNMGFREDIDVILESVPEE
RQFVLFSATLAKAILDIANKYQNNPITVNVVHKELTVPTVKQYYLEVRDSNKVEVLSRLI
DANNFKLSVVFCNTKRRVDDLCRDLQARGYSAESLHGDMKQLQRDNVMSRFRNGLIDILI
ATDVAARGIDVDDVDAVFNYDVPSDEEYYVHRIGRTGRAQREGVSYTFAAGKELAKLRDI
QRYTKSKIKLIKPPSIEDIQENKLSGIIDDVKAILAEGKLTKYTGFIEKMLEEVGDIEDE
NYATSLEVAAAFLKMTMDKMVMGASAEYSVEDLAARSNYDTSKIDGDFVRLFINLGRKDE
LQVSELVKFIASNCNITGKEIGRVDMLDKFSFFEIPKKHLGDIMANLVGESLKGRRVNIE
VANRKQDGRDRQMGRSTSRRQENNGERRGDSNRRQDGNRSNYRSRSNDKNNR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgattatagaaagtatattatttaaccaactagaagtatcagaagacattattagagcg
gctcatgacatgggatttgaggaaacaacacctattcaaggaaaagcaatccctattatt
ttacaaggtaatgatattattgcacaagcgccaacaggaactggtaaaacttgtgcattc
ggtattccagcaatagaaagtgttgacactacgaatgaaaaagtacaggtgcttattctt
tgtccaacgcgtgaacttgttatccaaacaactgaagagctttcagctcttgctaaatat
aagagaggtatacgtactcttcctatctatggaggacaacaaatagatagacagattata
gctcttaaaaagagacctcaaattattgtaggtactccaggtagaattatggatcacctt
agaagaggaactttaaaattagaacatttaaaaatgattatcttagatgaagcagacgaa
atgcttaacatgggattccgtgaagatattgatgttattttagaaagtgtaccagaagaa
cgtcaatttgtacttttctcagctactttagcaaaagccattttagatattgctaacaaa
tatcaaaataacccaatcactgttaatgttgttcataaagagttaacagtaccaacagtt
aaacaatactatctggaagtaagagatagcaacaaggtagaagttttatctcgtctaatt
gatgcgaataactttaagctttcagtagtattctgtaacactaaaaggcgtgtagatgat
ttatgtagagaccttcaagcaagaggttatagtgcagaatcacttcacggagatatgaaa
caacttcaaagagataatgttatgtctcgttttagaaatgggctcattgatattcttata
gcgacagatgttgccgctagaggaattgacgtagatgatgtagatgcagtatttaactat
gatgtaccaagtgatgaagagtactatgtacaccgtattggtcgtacaggtcgtgcacaa
agagagggtgtttcctatacttttgcagctggtaaagagttagctaaattacgtgatatt
caacgttatacaaaatcaaaaattaagcttattaagccaccttcaattgaagatattcaa
gaaaataaactttctggaattatagatgatgtaaaagctattttagctgaaggtaagctt
acaaaatatacaggttttattgaaaagatgcttgaagaagtaggcgacattgaggatgaa
aattacgcaacatctctagaagtagcagcagccttccttaaaatgactatggataaaatg
gttatgggagcttcagcagagtattcagtagaagacttagcagcacgtagcaattatgat
acaagcaaaattgatggggactttgtacgtttatttattaaccttggacgtaaagacgaa
cttcaagtatcagaacttgttaaatttatcgcatctaactgtaatattacaggtaaggaa
attggccgtgtagatatgcttgataaattctcattctttgaaattccaaagaaacatctt
ggagatattatggctaaccttgtaggcgaaagcttaaaaggacgaagagtgaatattgaa
gtagctaatagaaaacaagatggtagagatagacaaatgggtcgtagtacatcaagacgt
caggaaaacaatggtgagagacgtggagatagtaatagacgccaagatggaaaccgttca
aactaccgttctcgtagtaatgataagaataatagatag
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