Cellulosilyticum lentocellum: Clole_2188
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Entry
Clole_2188 CDS
T01448
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cle
Cellulosilyticum lentocellum
Pathway
cle03420
Nucleotide excision repair
cle03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Clole_2188
03430 Mismatch repair
Clole_2188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cle03400
]
Clole_2188
Enzymes [BR:
cle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clole_2188
DNA repair and recombination proteins [BR:
cle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clole_2188
MMR (mismatch excision repair)
Other MMR factors
Clole_2188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
DEAD
ResIII
YycC
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ADZ83902
UniProt:
F2JRI1
LinkDB
All DBs
Position
2403795..2405840
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AA seq
681 aa
AA seq
DB search
MDLNKSQKQAVTCLLKPTLVIAGPGSGKTHVIINRVHYMIEQLNCAPQHILVVTFSKLAA
EEMKQRYEKIHGVTGVTFGTLHSVFYRILRRSDPRRYAIEHLLLEDKKKSILQNLIKELE
LDEEEDFIENFTKHLSLMQNQLIESKNYYPEGISREAFIKLLKHYEAFKERHQAFDFDDM
LVACYYLLDNDDAILKVVRAQYQYILIDEFQDINEVQFRIIKKIAEAKRQIFVVGDDDQS
IYQFRGAKPEFLLDFKKHFPEVEEIYLDVNYRSTQMILNYSLALIEHNTKRYLKALTTPN
AKGSAPLFIPCKDAKEEALLIVNEIIKRKNEGLPLTEMAIIYRTNLQARPIVETLLAANI
PFCLRDGMVSLYDQWITQDLFAYLYLAENINQPELAARIINKPKRYISNAVMQQAKQMGG
HLFMNLLGLETLTEWQKNYIQQLLFDLQVLKEKDLKNAIAYIRRNIGYDQYVMDYASFRK
MPASSLLEVLDDIEDSTEGYVSFKEWENMLKTMSEEVKTQTNHKNIKQEALNLMTMHGSK
GLEFNTVFIIGVVNGTIPHHKSHLPAELEEERRLFYVAMTRAKENLFIYSPEERHGKNVD
ISPFISEIQVQLVQSKLKVGQSLYHKSLGKGLIMEILENAVMLVKFNNGQVRKIDSHYAI
KNAIIVWEDEIDEKPHKSKKE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaataagagccagaaacaagctgtgacctgtttacttaaacctaccttggtc
attgccggaccaggctcaggaaagacacatgtcattattaatcgtgttcattatatgatt
gagcaattaaactgtgcaccacagcatatacttgtcgtgacctttagtaaattagctgcg
gaagaaatgaaacaacgttatgaaaaaattcatggtgtaacaggtgtaacatttggtaca
ttacatagtgtattttatcgcattttaagacgttcagacccaagacgttatgccattgaa
catttacttttagaagataaaaagaaaagtatcttgcaaaaccttataaaagaattagag
cttgatgaagaagaagattttatagaaaactttacaaagcatctatcactcatgcaaaac
caacttatagaatccaaaaactattatcctgaagggatctctagagaagcgtttattaag
cttttaaaacattacgaagcctttaaagagcgtcatcaagcctttgattttgatgatatg
ctagtagcttgttattacttgttagataacgatgatgctattttaaaagttgtcagagcg
cagtatcaatatatcttaattgatgagtttcaggatattaatgaagtacagtttcgtatt
attaaaaaaatagcagaagcaaaacgtcaaatttttgttgtaggtgatgatgatcaaagt
atttatcagtttagaggtgccaagcctgagtttttactagattttaaaaagcattttcca
gaagtagaagagatttatttagatgttaattatcgttcaacacaaatgattcttaactat
agcctagctcttattgagcacaatactaagcgttatcttaaggcattaacaacgcctaat
gccaaggggagtgctcctttgtttattccttgtaaggatgctaaggaagaagctctttta
attgtgaatgaaattataaaacgcaagaatgaaggacttcctttaacagaaatggctatt
atttatcgtactaatttacaggcaagacctattgtagaaactttattagcagctaatatt
cctttttgtctacgtgacggtatggtcagcttatatgatcagtggattacacaagattta
tttgcctacttatatctagcagaaaatattaatcaacctgagctagcagcccgcattatt
aacaaacctaaacgctatattagcaacgctgttatgcagcaagctaaacagatgggtggg
catctttttatgaacttattagggctagaaaccttaactgagtggcaaaaaaactatatt
cagcagcttttatttgacctacaggttttaaaagaaaaggatttgaaaaatgcaatagct
tatattcgaagaaatatcggttatgatcaatatgtaatggactatgcaagttttcgaaag
atgcctgcttctagtctattagaagtactagatgatattgaagattcaaccgaaggctat
gtttcatttaaggaatgggaaaatatgctcaaaacgatgtccgaagaagtaaagacacaa
actaatcataaaaatatcaagcaagaagcacttaacttgatgactatgcatggttcaaaa
ggtctagaatttaatactgtttttattattggtgttgtaaatgggacaattcctcatcat
aaaagtcatttgcctgctgaattagaagaagaaaggcgtttattttatgtagctatgaca
cgtgccaaagaaaacttattcatttattctccagaagaacgacatgggaaaaatgtagat
atttctccatttatcagtgagattcaggtgcaattagtacaatcaaaactcaaagtaggc
caatcactttaccataaaagcctagggaaaggattaataatggaaatattggaaaatgct
gtgatgcttgttaaatttaacaatggacaagtacgaaaaatagatagtcattacgctata
aaaaatgctataatagtttgggaggatgaaatagatgaaaaaccacacaaatcaaaaaaa
gagtaa
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