Cellulosilyticum lentocellum: Clole_2257
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Entry
Clole_2257 CDS
T01448
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cle
Cellulosilyticum lentocellum
Pathway
cle03420
Nucleotide excision repair
cle03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Clole_2257
03430 Mismatch repair
Clole_2257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cle03400
]
Clole_2257
Enzymes [BR:
cle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clole_2257
DNA repair and recombination proteins [BR:
cle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clole_2257
MMR (mismatch excision repair)
Other MMR factors
Clole_2257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_11
DEAD
DEDDh_C
AAA_12
AAA_22
PhoH
DNApol_Exo
Helicase_RecD
Rv2179c-like
RIF2_lid
Motif
Other DBs
NCBI-ProteinID:
ADZ83966
UniProt:
F2JRP5
LinkDB
All DBs
Position
complement(2483593..2486106)
Genome browser
AA seq
837 aa
AA seq
DB search
MFDADYRALNNEQKQVVDTLDQNLLVLAPAGTGKTKVIALRTAYLVQHQQEPEKILCLTF
TNKAAKEMKERIQLYIPEQIKKMTIKTFHSFCYHLINHEKENSHFSFPCTLIDEADSLAI
IEKIIQTNKLNDDSVYYQQIISFFENIKRHSLTFPLEERYHYKMIVEDYFKSQDQLGQLG
RRREDSFLRRFGLKLLNTYRRYLLENNCIDFMDLIVEAKYLLEQPEILAKWRKQYDVIQV
DEMQDTSSREYDILKLLAGRQLSLFGDFNQTIYEWRGSNPHQMTAEYRRDFSPLEIHLKI
NYRSTKNLLEAANGYISSSRLYPMQCIAKASNEGEKITILEAGTKEEEISLLEIAIKESM
ENTNSIAVLTRTNEYAKKIAYSFNKRGIECTVIEDTKFFRKKEVKELLAFYDYSINDRNG
HALLKLGQHPYLNMPNWLLGELRNSKSCYMYLHDWFKSDSKDPYTILFEAYTHNNIVVLD
VESTGLSTIKDDVIQIAAIRYGKEGVVDQLDILLKPTKSVGESYYVHGFSDDLLQKEGME
PKEALKQFVHFIQGAVLVGHNVNYDLQIIKSMMSRYKLEPIGEYQVYDTLDLAYKVYPKL
SNHKLETLSKLIVTETIPTHNAMQDILATSEVLSHLLKHIEEKKQERLEKIEAYGCYVNE
YREKLATIKSYLLTHNLTDGLTFLMNECDFKGYYHSSQIETIRNLYRIINELEDQTLSYE
DNIINLLAFSALHYSEIEQSDLFKGRIPIITVHQAKGLEFDEVYIAGCNDKTFPSYRSLK
EHQLGEEMRLFYVALTRAKKKLYISYHQEAPKSIFIDQISEDYKTLKRYGGISKNTI
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgcagactatagagcattaaataatgaacaaaagcaagtagtggatacatta
gatcaaaacctattagttctggcaccagcaggaacaggtaaaacaaaagtaattgcctta
cgtacagcttatttagtacagcatcaacaagaaccggaaaaaattctgtgtttaaccttt
accaataaagcagctaaggaaatgaaagagcgtattcagctttacatacccgaacaaata
aaaaagatgacgattaaaacttttcattcgttttgttatcatcttattaaccatgaaaaa
gagaactctcacttttcctttccatgtacgctaattgatgaagcggatagcttagcgatt
atagaaaagattatacaaactaataagcttaatgatgactctgtatattatcaacaaatc
ataagtttttttgaaaatataaaaaggcatagtttaacttttccactagaagaacgctat
cattataagatgattgtagaagattattttaagtctcaagaccagttaggacaattaggg
agaagaagagaagattcatttttaagacgttttggtttaaagctcttaaatacgtataga
cgttatttgttagaaaataattgtattgactttatggatcttattgtggaggcaaaatac
ttattagaacagccggaaatattagctaaatggagaaaacaatacgatgtgattcaggtt
gatgaaatgcaggatactagtagtagagagtatgatatcttaaaattattagctggcaga
cagctttctttatttggagattttaatcaaaccatttatgaatggcgaggttctaatcct
catcaaatgacggcagaatacagacgggactttagtccattagaaattcatctaaagatt
aattatcgttctactaaaaatctcttagaagctgctaatggctatatttctagtagtagg
ttatatcctatgcaatgtattgctaaggcaagtaatgaaggagaaaagattacaattcta
gaggcaggaacaaaagaagaagaaatcagtttattagaaatagctattaaggaaagtatg
gaaaataccaatagtatagcagtacttactagaaccaacgaatatgcaaagaaaattgcc
tattcctttaataaaagagggattgaatgtacagttatagaagatactaagtttttcaga
aagaaagaagtcaaggagctattagctttttatgattatagtataaatgacagaaatggc
catgctttattgaagttaggacaacatccttatttaaatatgcctaattggttattagga
gagttaagaaactcaaaatcatgttatatgtatcttcatgattggtttaaaagtgattca
aaagatccttatactattttatttgaggcatatactcataataacattgttgtactagat
gtagaatctacggggttatcaacaattaaagatgatgttattcaaattgcagccattcgt
tatggtaaagaaggtgtagtagatcagcttgatattttattaaaaccgacaaagtcggtt
ggagagtcgtattatgttcatgggttctctgatgatctattacaaaaagaaggaatggaa
ccgaaggaagccttaaagcagttcgttcattttattcaaggtgcagttcttgtagggcat
aatgtgaattatgatttgcagattatcaaaagtatgatgagtcgttataagttagagcct
ataggagaatatcaagtatatgatactttagatttggcttataaggtttatcctaagtta
agtaatcacaaattagaaacactctcaaaattgattgtaacagaaacaatacctacacat
aatgccatgcaagatattttggctaccagtgaagtgcttagccatcttttaaagcatatc
gaagagaaaaagcaggaacgcttagaaaagatagaagcttatggctgttatgtcaatgaa
tacagagaaaagctagctactatcaaaagttatttattaacacacaatttaactgatgga
ttaaccttcttaatgaatgagtgtgattttaaaggctattatcattcatctcagattgaa
accatcagaaatttatatcgcatcatcaatgaactagaggaccaaacactttcgtatgaa
gataacattattaatctattagctttttcagcattacattatagtgaaatagaacaaagt
gatttatttaaagggcgtattcctattattacagtacatcaagccaaaggcttagaattt
gatgaagtgtatattgcaggatgtaatgataaaacttttccttcttacaggagtcttaag
gaacaccaattaggagaagaaatgaggcttttttatgtagcgcttacaagagccaaaaag
aaactgtatatttcttatcatcaagaagcaccaaaaagcatttttattgatcagattagt
gaggactataaaacgctgaaaagatatggaggaatatcgaaaaatacgatataa
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