Cellulosilyticum lentocellum: Clole_3024
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Entry
Clole_3024 CDS
T01448
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cle
Cellulosilyticum lentocellum
Pathway
cle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Clole_3024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cle03400
]
Clole_3024
Enzymes [BR:
cle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Clole_3024
DNA repair and recombination proteins [BR:
cle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clole_3024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
DEAD
PIF1
AAA_22
nSTAND3
UvrD-helicase
NPHP3_N
TraI_hel_assoc_N
MeaB
AAA
SLFN-g3_helicase
NTPase_1
UvrD_C
T2SSE
AAA_12
TsaE
SRP54
AAA_5
AAA_7
TIP49
TrwB_AAD_bind
CbiA
AAA_28
ResIII
Thymidylate_kin
AAA_29
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ADZ84721
UniProt:
F2JNE5
LinkDB
All DBs
Position
complement(3276540..3278684)
Genome browser
AA seq
714 aa
AA seq
DB search
MENLRGVVERITYANEDTGYSVIKIRCKGYHELVTVVGSMATVNVGAVITMKGFWSSNPK
YGRQFEAKEWEETLPASIYGIEKYLGSGLIKGIGPVYAKKIVNLFKEQTLDIIEEEPDRI
IEVPGIGKKRVEMIKKAWQDQKEIKNIMIFLQSYGVSTSFGSRIYKYYGNESIEVVKENP
YQLADDIYGIGFKTADGVAAKLGIEKDSFKRCRAGLFYTLSQLSEEGHCFARTEQLVAKC
VEILEVEETKVIMTIDHLIKEKELIKEEPDAIYLPPFYFSERGVAKRLKEIMAGHTLRQV
KKSDEVIAFLERTEQMTYDDIQREAIHLASRSKVMLLTGGPGTGKTTTTHGIISLFKESG
MEVLLTAPTGRAAKRMSEATGMEAKTIHRLLECKPPEGYKKNEDHPLVGDVLIIDEASMI
DIILMYNLLKAIPDHMILVIVGDIDQLPSVGAGNVLQDMIASGVIPTIKLERIFRQAMGS
KIITNAHKINKGENPDLRGGKDSNFFFIEQEESQGVIDTIVKLCTKRLPQYYKVNPIKDI
QILTPMQRSETGAANLNTVLQSALNKNTLHLKRGATEYRLNDKVMQIRNNYDKEVFNGDV
GFISDIDLEERTLKVTFDEREIEYEALELDELVLAYATTIHKAQGSEYPIVVMPLTFSHY
VMLQRNLIYTGITRAKKVVVLVGNRQAIYVAVKNNEVKNRNTKLAERLQSESVI
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttacgtggtgtagtagagcgcattacttatgctaatgaggatactggttat
agtgtgattaagattaggtgtaaaggctatcatgagcttgtaacggtagtggggagtatg
gctactgttaatgtaggtgcggttattactatgaaagggttttggtcgagcaatcctaaa
tatggtaggcagtttgaggctaaggaatgggaggagactttgcctgctagtatttatggt
atagagaagtatttaggcagtgggcttattaagggaattgggcctgtgtatgctaagaag
attgttaatttatttaaggagcagacactagatattatcgaagaagaacctgatcggatt
atagaggttcctgggataggtaaaaaacgtgtagagatgattaagaaagcttggcaggat
caaaaggagattaagaacattatgattttcttacaatcctatggtgtatccacttctttt
ggaagtcgtatttataaatactatggcaatgagagtattgaggtggttaaagaaaatcct
tatcagctagcagatgatatttatgggattggttttaaaacagctgatggggtagcagct
aagctagggatagagaaggattcttttaaaagatgccgtgcagggcttttttacactctg
agtcaactctcagaggaaggacactgttttgctagaacagagcaattagtggctaaatgt
gtagagatattagaggtagaagaaacaaaggtgataatgactatcgaccatttgattaaa
gaaaaggaactgattaaagaagaaccagatgccatttacttaccacctttttattttagt
gaaagaggggtagcgaaacgtttaaaggagattatggcaggtcatacgctaaggcaagtg
aaaaagagtgatgaggttattgctttcttagaaagaacggagcagatgacttatgatgat
attcaaagagaagccattcatcttgcaagtaggtctaaggtgatgctattgacaggtggt
ccgggaacaggaaagacaaccactactcacgggattattagtttgtttaaagagtcaggg
atggaagtgctgttgactgcaccaacaggaagagcggctaaaaggatgagtgaagccact
ggtatggaagctaagaccattcacaggctattagagtgtaagccacctgaggggtataag
aaaaatgaggatcatccattagtaggtgatgtccttataatagatgaagcttcaatgata
gatattatactgatgtataatttattaaaagccattccagatcatatgattcttgttatt
gttggagacattgatcagcttccttctgtaggtgcaggcaatgtgcttcaagatatgata
gcttctggcgttatccctactattaagctagaacgtatttttagacaagctatgggaagt
aaaattattaccaatgcccacaagattaataaaggagaaaatccggatttaagaggtgga
aaggatagtaatttcttcttcatagagcaagaagagagtcagggggttattgatacgatt
gtcaaactatgtaccaaaaggctgcctcagtattataaagtgaatccaatcaaagacatt
cagatactaacacctatgcagcgttctgaaacaggtgctgctaacctcaatacagtactg
caatcagcacttaataaaaatacgcttcatttaaaacgaggggctactgaatataggctc
aatgacaaagtgatgcagatacgaaataactatgataaggaagtctttaacggagatgta
ggctttatttcagacattgatttagaggagcgtacgcttaaagtgacctttgatgagcgg
gaaatagagtatgaagcattagaattagatgaacttgtactggcttatgccaccacgatt
cataaggcccagggaagtgaatatcctattgtagtcatgcctcttacttttagtcattat
gtgatgctccagcgtaatttaatttatacaggtataacgagagctaaaaaggtagtggtg
ttggtaggtaatcgtcaagcgatttatgtagcagtgaagaacaatgaagtaaaaaataga
aataccaaattagctgagagactacaaagtgaatccgtgatttag
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