Cellulosilyticum lentocellum: Clole_3517
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Entry
Clole_3517 CDS
T01448
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cle
Cellulosilyticum lentocellum
Pathway
cle03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cle00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Clole_3517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cle03021
]
Clole_3517
03400 DNA repair and recombination proteins [BR:
cle03400
]
Clole_3517
Enzymes [BR:
cle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Clole_3517
Transcription machinery [BR:
cle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Clole_3517
DNA repair and recombination proteins [BR:
cle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Clole_3517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ADZ85201
UniProt:
F2JSG3
LinkDB
All DBs
Position
complement(3846260..3847225)
Genome browser
AA seq
321 aa
AA seq
DB search
MLEFEKPQIEIKELSQDGKYGCFVVEPLERGYGITLGNSLRRILSSSLPGSAISSVKVDG
VLHEFSSIPGVKEDVVEIILNLKGLAIRDTSQGTEPKVIYIEKSGEGPVTGADIKCGPEI
EILNPEHHIATLNGGANSNLSIEMTVTTGRGYEGVDKLKKTDLPIGVIPVDANANYTPVE
RVNFIVEDTRVGQQTDYDKLTLEVWTNGTLKPDEAVSLAAKVLSEHLNLFIDLSENARTT
EIMVTKEDDSKEKTLEMTIEELDLSVRSFNCLKRAGINTVEDLTNKTEEEMMKVRNLGRK
SLEEVFQKLNELGFQLKPSEE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgttggaatttgaaaaaccacaaattgagattaaagaattatcgcaagatggtaaatat
ggctgtttcgtagtagaaccattagaaagaggatatggaatcacattaggcaatagcctt
cgtcgcattctttcttcttctcttcctggctctgctattagcagcgtcaaagtggatggt
gtacttcatgagtttagttcaattcctggagtaaaagaggatgttgttgaaattatcctt
aaccttaaaggtcttgctatccgcgatacaagtcaaggtacagaacctaaagtaatttat
attgagaaatctggagaaggcccagtaactggagcagatattaaatgtggtccagaaatt
gaaatccttaatccagaacatcatattgctactttaaatggtggagcaaactctaacctt
tcaattgaaatgacagtaacaactggccgtggatatgaaggtgttgataagctgaagaaa
actgatcttccaataggagtgatcccagttgatgctaatgctaactacacaccagtagag
cgtgtaaactttattgtagaggatacacgtgttgggcaacaaactgactatgataaactt
acattagaggtttggacaaatggtacacttaagccagatgaagctgtatctttagctgca
aaagttttaagtgaacatttaaaccttttcattgacttatcagagaatgcacgtactaca
gaaattatggtaacaaaagaagatgattctaaagaaaaaactttagaaatgacaatcgaa
gagttagacctctcagttagatcattcaactgtttaaaacgtgcgggaatcaacacagtt
gaagacttaacaaacaagacagaagaagaaatgatgaaagttcgtaatcttggacgtaaa
tcattagaagaggtattccaaaaactcaacgaacttggttttcaacttaaaccaagtgaa
gaataa
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