KEGG   Cellulosilyticum lentocellum: Clole_3704
Entry
Clole_3704        CDS       T01448                                 
Name
(GenBank) DEAD_2 domain protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
cle  Cellulosilyticum lentocellum
Pathway
cle03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cle00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Clole_3704
  09124 Replication and repair
   03420 Nucleotide excision repair
    Clole_3704
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cle03021]
    Clole_3704
   03036 Chromosome and associated proteins [BR:cle03036]
    Clole_3704
   03400 DNA repair and recombination proteins [BR:cle03400]
    Clole_3704
Enzymes [BR:cle01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Clole_3704
Transcription machinery [BR:cle03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Clole_3704
Chromosome and associated proteins [BR:cle03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    Clole_3704
DNA repair and recombination proteins [BR:cle03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Clole_3704
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 HBB DEAD ResIII IstB_IS21 Helicase_C DivIVA
Other DBs
NCBI-ProteinID: ADZ85387
UniProt: F2JHP5
LinkDB
Position
complement(4051012..4053438)
AA seq 808 aa
MRISEGLVKISVRELVEFVLREGSITSGVTSSNRAVLGTLAHKKIQESMEANYEAEVKMV
HECEKDGIIFVVEGRADGIIRDLVGVTIDEIKTTTKDLSLIDENYNSLHWAQAKCYAYFY
AKENAQKEMQVRLTYYHIETKEIKHLQRGFYFEELEAFFNQVITKYSKWIRFYMEWTKKR
DGSLKELAFPFESYRRGQRELAVSVYKSIQQTNNLYVSAPTGIGKTMSTLFPALKAMGEG
HGSKIFYLTAKTITRTIAEEAAVRLYEKGAKIKTITLTAKDKICFCDKRQCHPDYCEWAN
GHYDRVDDAVYEIINEEDLISRSMVEDYARKHRVCPFELALDLSIWADIVICDYNYVFDP
SVGLKRFADNRDFVLLVDEAHNLVDRAREMYSASLSKRQVLSVKKNLGKGYLTISKELTK
LNEWFLDLRREYIDELGVYISKEAPKTLYQINRRLIAACDKKLQQGGENNLPADLIDLYF
EAYSFNRIYELFDEHYVVYGESSGQEVRLKLFCIDPSTAISSITSTCKSAIFFSATLLPI
DYYKYMLGGKEDKAIAFDSPFIEENALRLITTDVSTRYRHREGSYTKICNAICQLVEQKI
GHYMVFFPSYKYMLEVFEYLRVMTSQRKEDSDLQSDLQNESYFSVYDDLGRLKYEVYKQT
SEMSEEQREGFLERFVPNPDTTTINFCVLGGIFSEGIDLTGDRLIGVVVVGVGLPQLGLE
RDLIKNHFDEEEKDGYHYAYTYPGINKVLQAVGRLIRTEEDKGSILLIDDRFNTPLYESL
LTPEFYQAKKVKTPEIASYVKRFWQQIE
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgcgtattagtgaaggactagtgaaaatctccgttagagagctagtagaatttgtactc
agagaaggaagtatcacctcaggggtaactagtagcaatagggctgttttaggaacctta
gctcataagaagattcaagaaagtatggaggctaattatgaggcagaggtcaaaatggtt
catgagtgcgaaaaggatggcattatctttgtggtagaaggtagagcagatgggattatt
agagaccttgtaggggttactattgatgaaatcaaaactacaactaaagacctaagctta
attgatgagaattacaattctcttcactgggctcaggccaaatgttatgcttatttttat
gctaaagaaaatgctcagaaggaaatgcaggtacgccttacctattatcatatagaaaca
aaagaaatcaaacatttgcaaagaggcttctactttgaagaattagaggctttctttaat
caggttattacgaaatactcaaaatggattcgcttttacatggagtggactaaaaagagg
gacggttctttaaaggaactagcctttccttttgaaagctaccgcagggggcaaagagag
ttagctgttagtgtttataaaagtattcagcaaaccaataacctttatgtcagtgcacca
acaggcataggcaagaccatgtctacactttttccggctttaaaggctatgggagaagga
catggcagtaagattttttatcttactgcaaaaaccattactaggaccattgcagaagaa
gcagctgtgcgcttatacgaaaaaggggctaagattaaaacgattactttaactgctaaa
gacaagatttgtttttgtgacaaaaggcagtgccatcctgattattgtgaatgggccaat
ggccattatgacagggtagatgacgcggtttatgagattattaatgaggaagatttaatt
tctagaagcatggtagaggattacgctagaaaacatcgggtatgtccctttgaattagcc
cttgatttatctatatgggcagatattgtgatttgtgattataactatgtatttgaccct
agtgtaggactaaagcgatttgcagataacagagattttgtgcttttagtagacgaggca
cataacctagttgatcgtgcgagagaaatgtattctgctagtctttcgaaaagacaagtc
ttaagtgtgaagaaaaacttagggaaaggctaccttactatttctaaagaacttacaaag
cttaatgagtggtttttagatttaagaagggaatatatagatgaattaggtgtttatatt
agtaaggaggcccctaaaacactttatcagattaatagaaggctcatagctgcatgtgat
aaaaagctgcagcaggggggagaaaataatttaccagctgatttaatagatttgtatttt
gaggcttatagttttaatcgtatttatgaactttttgatgaacattatgtcgtttatgga
gaaagtagtggacaagaagtgagattaaagcttttttgtatagatccaagtactgctatt
agtagcattacaagtacttgcaaaagtgctatcttcttctcggctaccctcttacctatt
gattattataaatacatgctaggaggtaaggaggataaggccatagcttttgattcccct
tttatagaagaaaatgctttaaggctaattactacggatgtatccactagatatagacat
agagaaggaagttacacaaagatttgcaatgccatttgtcagttagtagaacaaaaaata
ggacattacatggtgttctttccatcttataaatatatgttagaggtatttgagtatcta
agggtcatgacaagtcaaagaaaagaggattctgacttacaatctgacttacaaaatgaa
agttacttttcagtatatgatgatttaggaaggttaaaatacgaagtttataagcaaacc
agtgaaatgagtgaagaacaaagagaaggcttcttagaaaggtttgtccccaatccagat
accactaccatcaacttctgcgtattaggaggcatcttttctgaggggatagacttaaca
ggagataggcttattggggtagtggtagtaggtgtaggcttaccacagcttggcctagaa
agagaccttattaagaatcactttgatgaagaggaaaaagacggctaccactatgcctat
acttacccaggcattaacaaagtactacaagcagtaggacgtcttattcgaacagaagaa
gataaaggaagtatcttgctaatagatgaccgtttcaatacccctctttacgaaagcctt
ctaacaccagagttttaccaggctaaaaaagtaaaaacaccagaaatagcatcctatgtc
aaacgcttctggcagcaaatagaatga

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