Entry |
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Name |
(GenBank) DEAD_2 domain protein
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KO |
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Organism |
cle Cellulosilyticum lentocellum
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cle00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Clole_3704
09124 Replication and repair
03420 Nucleotide excision repair
Clole_3704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cle03021]
Clole_3704
03036 Chromosome and associated proteins [BR:cle03036]
Clole_3704
03400 DNA repair and recombination proteins [BR:cle03400]
Clole_3704
Enzymes [BR:cle01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Clole_3704
Transcription machinery [BR:cle03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Clole_3704
Chromosome and associated proteins [BR:cle03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Clole_3704
DNA repair and recombination proteins [BR:cle03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Clole_3704
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(4051012..4053438)
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AA seq |
808 aa
MRISEGLVKISVRELVEFVLREGSITSGVTSSNRAVLGTLAHKKIQESMEANYEAEVKMV
HECEKDGIIFVVEGRADGIIRDLVGVTIDEIKTTTKDLSLIDENYNSLHWAQAKCYAYFY
AKENAQKEMQVRLTYYHIETKEIKHLQRGFYFEELEAFFNQVITKYSKWIRFYMEWTKKR
DGSLKELAFPFESYRRGQRELAVSVYKSIQQTNNLYVSAPTGIGKTMSTLFPALKAMGEG
HGSKIFYLTAKTITRTIAEEAAVRLYEKGAKIKTITLTAKDKICFCDKRQCHPDYCEWAN
GHYDRVDDAVYEIINEEDLISRSMVEDYARKHRVCPFELALDLSIWADIVICDYNYVFDP
SVGLKRFADNRDFVLLVDEAHNLVDRAREMYSASLSKRQVLSVKKNLGKGYLTISKELTK
LNEWFLDLRREYIDELGVYISKEAPKTLYQINRRLIAACDKKLQQGGENNLPADLIDLYF
EAYSFNRIYELFDEHYVVYGESSGQEVRLKLFCIDPSTAISSITSTCKSAIFFSATLLPI
DYYKYMLGGKEDKAIAFDSPFIEENALRLITTDVSTRYRHREGSYTKICNAICQLVEQKI
GHYMVFFPSYKYMLEVFEYLRVMTSQRKEDSDLQSDLQNESYFSVYDDLGRLKYEVYKQT
SEMSEEQREGFLERFVPNPDTTTINFCVLGGIFSEGIDLTGDRLIGVVVVGVGLPQLGLE
RDLIKNHFDEEEKDGYHYAYTYPGINKVLQAVGRLIRTEEDKGSILLIDDRFNTPLYESL
LTPEFYQAKKVKTPEIASYVKRFWQQIE |
NT seq |
2427 nt +upstreamnt +downstreamnt
atgcgtattagtgaaggactagtgaaaatctccgttagagagctagtagaatttgtactc
agagaaggaagtatcacctcaggggtaactagtagcaatagggctgttttaggaacctta
gctcataagaagattcaagaaagtatggaggctaattatgaggcagaggtcaaaatggtt
catgagtgcgaaaaggatggcattatctttgtggtagaaggtagagcagatgggattatt
agagaccttgtaggggttactattgatgaaatcaaaactacaactaaagacctaagctta
attgatgagaattacaattctcttcactgggctcaggccaaatgttatgcttatttttat
gctaaagaaaatgctcagaaggaaatgcaggtacgccttacctattatcatatagaaaca
aaagaaatcaaacatttgcaaagaggcttctactttgaagaattagaggctttctttaat
caggttattacgaaatactcaaaatggattcgcttttacatggagtggactaaaaagagg
gacggttctttaaaggaactagcctttccttttgaaagctaccgcagggggcaaagagag
ttagctgttagtgtttataaaagtattcagcaaaccaataacctttatgtcagtgcacca
acaggcataggcaagaccatgtctacactttttccggctttaaaggctatgggagaagga
catggcagtaagattttttatcttactgcaaaaaccattactaggaccattgcagaagaa
gcagctgtgcgcttatacgaaaaaggggctaagattaaaacgattactttaactgctaaa
gacaagatttgtttttgtgacaaaaggcagtgccatcctgattattgtgaatgggccaat
ggccattatgacagggtagatgacgcggtttatgagattattaatgaggaagatttaatt
tctagaagcatggtagaggattacgctagaaaacatcgggtatgtccctttgaattagcc
cttgatttatctatatgggcagatattgtgatttgtgattataactatgtatttgaccct
agtgtaggactaaagcgatttgcagataacagagattttgtgcttttagtagacgaggca
cataacctagttgatcgtgcgagagaaatgtattctgctagtctttcgaaaagacaagtc
ttaagtgtgaagaaaaacttagggaaaggctaccttactatttctaaagaacttacaaag
cttaatgagtggtttttagatttaagaagggaatatatagatgaattaggtgtttatatt
agtaaggaggcccctaaaacactttatcagattaatagaaggctcatagctgcatgtgat
aaaaagctgcagcaggggggagaaaataatttaccagctgatttaatagatttgtatttt
gaggcttatagttttaatcgtatttatgaactttttgatgaacattatgtcgtttatgga
gaaagtagtggacaagaagtgagattaaagcttttttgtatagatccaagtactgctatt
agtagcattacaagtacttgcaaaagtgctatcttcttctcggctaccctcttacctatt
gattattataaatacatgctaggaggtaaggaggataaggccatagcttttgattcccct
tttatagaagaaaatgctttaaggctaattactacggatgtatccactagatatagacat
agagaaggaagttacacaaagatttgcaatgccatttgtcagttagtagaacaaaaaata
ggacattacatggtgttctttccatcttataaatatatgttagaggtatttgagtatcta
agggtcatgacaagtcaaagaaaagaggattctgacttacaatctgacttacaaaatgaa
agttacttttcagtatatgatgatttaggaaggttaaaatacgaagtttataagcaaacc
agtgaaatgagtgaagaacaaagagaaggcttcttagaaaggtttgtccccaatccagat
accactaccatcaacttctgcgtattaggaggcatcttttctgaggggatagacttaaca
ggagataggcttattggggtagtggtagtaggtgtaggcttaccacagcttggcctagaa
agagaccttattaagaatcactttgatgaagaggaaaaagacggctaccactatgcctat
acttacccaggcattaacaaagtactacaagcagtaggacgtcttattcgaacagaagaa
gataaaggaagtatcttgctaatagatgaccgtttcaatacccctctttacgaaagcctt
ctaacaccagagttttaccaggctaaaaaagtaaaaacaccagaaatagcatcctatgtc
aaacgcttctggcagcaaatagaatga |