Cimex lectularius (bed bug): 106661310
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Entry
106661310 CDS
T05603
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
clec
Cimex lectularius (bed bug)
Pathway
clec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106661310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clec03019
]
106661310
Enzymes [BR:
clec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
106661310
Messenger RNA biogenesis [BR:
clec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106661310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
PUS7L_N
RNA_bind
Motif
Other DBs
NCBI-GeneID:
106661310
NCBI-ProteinID:
XP_014240094
UniProt:
A0A8I6RAS4
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MVEVNRHNFEEHLNQIQYDLNKCAYYSVDCEFTNLPTDFDVENSVFDGGDDRYAKIRGKI
SGCVILQVGLTPFIFNRDLNHYKASLYKFYIFPNDFGPLNQFVVFKASTVRFLRDNKFDF
NKGFYDGITCLNKTQEREIKSEIESGKLTHSLIEAVTYDEYRCITKLSSEIGHWYINCTQ
GESRQVPCKKDDHNYNYLLHDEIRTRFPKLWTFQETSEIVLVKNVGEVDRKKFEFDKNDI
KEKILDSLLGFSKVYQMMVECKKPLVGHNLFIDLLTMYNQFYDELPRSFSEFKSELHRLF
PHIYDTKFMSYEIKKMSKKDALENNSLGNLYNYYRDKNNVFHGPRIVFDSGIYDNVNDQH
MHDAGWDAYATGYCFMKLCHTVVTKNNFNDPNKIWSSVEHLKRVEFLENRINLPRARISY
LNLVGPEPRTTRPPLLFLEAVRSSKCDILKLNQILRKHSNIHIKTVSPSSAILAAANYTS
YKEVLRDINEHKDFRIEKYSVLKHHKFIKPLILAGIVIPTVLTFWITVKNFR
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagtcaacagacataatttcgaggaacacctcaaccaaatacagtacgatctg
aataaatgcgcctactactcggtagattgtgaattcacgaatttacccactgattttgat
gtggaaaatagtgtatttgatggaggtgatgatagatacgcaaaaatccgaggaaagatt
agtggatgtgtaattttacaagttgggctaacaccttttattttcaaccgagaccttaac
cattacaaagcctctttgtataaattttatatattcccaaatgactttgggccactaaac
caatttgtagtttttaaggcgtctacagtgagatttcttagggacaataaatttgacttc
aataagggattttatgatggcataacatgtttgaataaaacacaagagcgggaaatcaaa
tcggaaatagaatctggtaagttgacacacagtcttatagaagcggtgacatatgatgaa
tacaggtgtataacaaaattatcatctgagatcggccattggtacataaactgcacacaa
ggggaaagtcggcaggtgccttgtaagaaagacgaccacaattacaattatttattacac
gatgaaattagaactcgcttccctaagctgtggacatttcaagaaacatcggaaatagtt
ttagttaagaacgttggggaggttgatagaaaaaaatttgaattcgataagaatgacatc
aaagaaaagattttggactccctcttaggtttttcaaaagtatatcaaatgatggtggag
tgcaaaaaaccattagtaggtcataacttgttcatagatttgctcacaatgtacaaccag
ttttacgatgagcttcctcgatctttttctgagttcaaatctgaacttcaccgtcttttc
ccacatatatacgatacaaaatttatgagttatgaaataaaaaaaatgtccaaaaaagat
gctttagaaaacaattcactaggaaatttatacaattattacagagataaaaataatgtt
ttccacggcccaaggatagtatttgacagtggcatctacgataatgttaatgatcagcat
atgcatgatgccggctgggatgcctacgcgacaggatattgttttatgaaactctgccat
accgttgtaacaaaaaacaatttcaatgaccctaataagatttggtctagtgtggaacac
ttgaagagggtggagtttttagaaaatcgtataaatctgccgagagcacgaatttcctat
ttgaatttagtcggtccagaaccaaggacaacaaggccccctttgttgttccttgaagca
gttcgcagtagtaaatgtgatattcttaagttaaatcaaatattgaggaaacattcaaat
atacatataaagacggtttcaccttcttctgcaatacttgcagcagctaactatacaagt
tataaagaagttttaagagatattaacgagcataaagattttcgaatagagaaatattct
gttctgaagcaccataaatttatcaaaccattgatactggccggtatcgtcatcccgaca
gttctcacgttctggatcacagttaaaaattttcgatag
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