Cimex lectularius (bed bug): 106662631
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Entry
106662631 CDS
T05603
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
clec
Cimex lectularius (bed bug)
Pathway
clec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106662631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clec03041
]
106662631
Enzymes [BR:
clec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106662631
Spliceosome [BR:
clec03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106662631
Complex B
106662631
Complex C
U2 SnRNP specific factors
106662631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
P-loop_SecA
Cas3-like_C_2
DUF6801
Motif
Other DBs
NCBI-GeneID:
106662631
NCBI-ProteinID:
XP_014242334
UniProt:
A0A8I6REL4
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MSYQRGGDEKPKFGFQLMSKAERAAALPPPPTAALSKQGYSTMTSITENALSASWGLPKK
RSKTEEEYFDEEDETPKLVYIPAPGSPTGQQQSDSDEEDPLDAYMAGIENQVQKLGSKAT
VPTEADKNKGIRDDIEEEDVEESYYRYMEENPRAGLQDDESDVEIEYDEDGNPIAPKKSK
IIDPLPPIDHSTIKYEDFVKNFYLEHEDITKLDAEKVAELRNTLGIRVSGPHPPNPVTSF
GHFGFDDALMKAIRKSEYTQPTPIQTQAVPASLSGRDIIGIAKTGSGKTAAFIWPLLVHI
MDQKEIGVGDGPIGLILAPTRELSQQIYTEAKRFGKVYNINVVCAYGGGSKWEQSKALEE
GAEIVVATPGRMIDLVKMKVTNLQRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTL
LFSATFKRKVEKLARDVLTDPVRIVHGDAGGEANEDVTQHVLVMLQSNKFPWLLAHLVDF
QSTGSILIFVTKKINAEELSTQLKLKEIDTLLLHGDMDQIERNRVITAFKKKDVDILVAT
DVAARGLDIPHIRTVINYDLARDIDTHTHRIGRTGRAGQKGSAYSLVTSGDKEFAGHLVR
NLEGANQDVPQPLLDLALQSSWFRKSRFKTGKGKSMNVGGAGLGFRERPGLGCVEGQTNS
RPSVSISEVVSKSSRGPVMDRLSAMKAAFRAQYQSQFTASEDHTWEQTRDNPEGAPKAPA
VKGPLKERRAKRSRWDTPT
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccagaggggcggcgacgagaagcccaaattcggcttccagctgatgagcaaa
gccgagagggcggcggcactgcctccgcctccgacggcggccctcagcaagcagggctat
tcgacgatgacgtccataacagaaaacgcgctctccgcctcctggggcctaccaaagaag
aggtcaaagactgaagaagagtactttgatgaggaggatgagacaccaaaacttgtctat
attccagcacctggcagccccacggggcagcagcagtcagattcagacgaggaagaccca
ttggatgcgtacatggctggaattgaaaatcaggtgcagaaactgggttcgaaagcaacc
gttccaactgaagctgataaaaataaaggtatcagggatgacatagaagaagaagatgtc
gaggagtcatattataggtatatggaagagaatccaagagcaggccttcaagatgatgaa
tctgatgtggaaatagagtatgatgaagacggaaatccaattgcgcccaaaaaatcgaag
atcatcgacccgttaccaccgattgaccattcgacgattaaatatgaggattttgtgaag
aacttttatttggaacacgaagacattacaaagttggacgctgaaaaggtagctgaactg
aggaacacccttggaattcgagtttctggtccacatccaccgaacccagtcacaagtttt
ggacattttgggtttgatgatgcccttatgaaagccattcgaaagtctgaatatactcaa
ccgactccgattcaaactcaagcagtacctgcttccctttctggaagggatattatcggt
attgcaaaaactggaagcggtaaaacagctgcatttatctggccccttcttgtccacatc
atggatcagaaggagataggtgtgggcgacggcccgatcggattgatcttagcccccact
agagaactttcccaacagatttacacagaagctaagaggtttgggaaagtttacaacatc
aatgtggtgtgtgcatacggaggagggtcaaaatgggaacaatcaaaagccttagaagaa
ggtgccgaaattgttgtcgctacacctggaaggatgattgatctggtcaagatgaaagta
acaaatctgcaaagggtcacgttcttagttttggacgaagcggaccgtatgttcgatatg
ggctttgaacctcaagtaaggtcgatctgcaatcatgttaggccggatagacaaacactg
ttgttttcggcgacttttaaaagaaaagtggagaaactcgccagagatgtgcttaccgat
cctgtacgaatcgttcacggtgatgctggtggggaagcaaacgaagatgttacccaacat
gttctcgttatgctccaatcgaacaagtttccttggctcctagcacaccttgtcgatttt
cagtcaacaggatcgattcttatttttgtaacaaagaagattaatgcagaagaattgtca
acccagctcaaactgaaagaaattgacactctcctgttgcacggtgatatggatcaaatt
gagagaaatcgtgtaataaccgcatttaagaaaaaagatgttgatatacttgtcgcgact
gacgtcgctgcccgtggtttggacattccacacatacggactgtgataaattacgacctc
gctagagacatagacacgcacacccatagaattggtagaactggaagagcagggcaaaag
ggcagcgcttattctttagtgacgtctggcgacaaagaatttgcagggcaccttgtgaga
aatttggaaggagccaaccaagacgttccgcaaccgcttctcgacctagccctccagagc
tcatggttcagaaaatcaaggtttaagactggcaaaggaaaatcaatgaatgtcggagga
gctggcttaggatttagagaacgacctggtttgggctgtgtagaagggcaaaccaattcc
cgcccatcagtgagcatttctgaagttgtgtctaaaagttcaagggggccagttatggat
aggttatccgctatgaaagccgcttttagggcacagtatcaaagtcagtttactgcgtct
gaggatcatacttgggaacagactcgagacaacccagaaggcgcgcccaaggccccggca
gtgaagggacctctgaaggaaagaagagctaagagaagcagatgggacacacccacatag
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