Cimex lectularius (bed bug): 106666011
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Entry
106666011 CDS
T05603
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
clec
Cimex lectularius (bed bug)
Pathway
clec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106666011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clec03041
]
106666011
Enzymes [BR:
clec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106666011
Spliceosome [BR:
clec03041
]
Complex C
Other components
Step II factors
106666011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
ResIII
T2SSE
Microtub_bd
ATPase
PhoH
AAA_16
AAA_7
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106666011
NCBI-ProteinID:
XP_014248358
UniProt:
A0A8I6RRR1
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MEADDEDVYRLSGREETGGGLIIKKKPTPQGSFEFKVPSPKASLFGLDKLAALRRKEREE
TPDPKKEKYDAVFKKPERKDRRYREKMDETPTHTGGVSQEAKERMLEHSKKEKHRGIQIA
TAKEKDRSKRRSIDREMRHRDRHRHVKREKRDRHRDNHGDRHESSRSRGWSMSPRFSDEP
STPLFSVKNTPSKTGWEEDDGPSERSSWDLPTPKTHKMDEDGEWSERSRRPTPAHRYNSW
AAERKATGATPLPGKEDEIAWSSGTDRENWEAEQRKLDREWYGLDEGFDEGRDPFGEMST
EYIKKRERQLESRKNKRLSAQQRQINKDNELWERNRMLTSGVVQSVDLDEDFDEENEARV
HLLVHNIVPPFLDGRIVFTKQPEPVVPVKDPTSDMALVSRKGSALVRAYREQKERRKAQK
KHWELAGTTIGNIMGIKKKDDREEDKAEGEPDADYKTGQKFAEHMKDTSAATSEFARKKT
IQEQRNYLPVFACRQELLNIIRENSIVIIVGETGSGKTTQLTQYLHEDGYSRYGMVGCTQ
PRRVAAMSVAKRVSDEMASPLGDTVGYAIRFEDCTSENTVIKYMTDGILLRESLREPELD
NYSAIIMDEAHERSLNTDVLFGLLREVVAKRQDLKLIVTSATMDASKFAMFFGNVPVYTI
PGRTFPVELFFSKNPVEDYVDAAVKQALQIHLQPVKGDILIFMPGQEDIEVTCEVLAERL
TEIENAPPLSVLPIYSQLPSDLQAKIFQASPDGIRKCVVATNIAETSLTVDGIMYVVDSG
YCKLKVYNPRIGMDALQIYPISQANSNQRSGRAGRTGPGHAYRLYTERQYKDELLVSTVP
EIQRTNLANTVLLLKSLGVQDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGSLTPLGR
QMAEFPLDPPQCQMLIVSNEMGCTAEILIIVSMLSVPTIFYRPKGREDEADSVREKFQVP
ESDHLTFLNVYIQWKQNKYSASWCNEHFIHAKAMKKVREVRQQLKDILDQQKMEIMSCGS
DWDIVRKCICSAYFHQAARLKGIGEYVHCRTGMPCHLHPTSALFGMGFTPDYVVYHELVM
TSKEYMQCVTAVDGHWLAELGPMFFSVKETGRSGSARRRQALEHLQEMEAQMAAAQEQLR
QREEDRERRESRAVSVRQVIATPGAAQNKPYRTPLRLGM
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggacgatgaagacgtttacaggctgtccggacgagaggagaccggaggaggg
ctgatcatcaagaaaaaacccactccacagggtagcttcgagttcaaagtaccgtctccg
aaggcatctctcttcggactagacaaactcgccgctttacgaagaaaggaaagggaagaa
actcctgatcccaaaaaagaaaaatatgatgctgtatttaaaaaaccagaacggaaggat
aggcgttatcgagaaaaaatggatgagacacctactcatacaggtggcgtgagtcaagaa
gccaaagaacgtatgctggaacactcaaaaaaagagaaacacaggggtattcaaattgca
acagctaaagaaaaagatagaagtaaaaggcgttctatagatagggaaatgagacatagg
gacagacacaggcatgtgaaaagggagaaaagggacagacatagagataatcatggtgat
agacatgaaagctctagaagtcgtggctggtccatgtcgccgagatttagcgacgagcca
tcaacacccttgttctctgttaagaacacaccttcaaaaacaggatgggaagaagacgac
gggccatccgaaagatcatcctgggatcttcccacaccaaaaactcataagatggatgaa
gacggtgaatggtccgagcgatctagaaggcctacaccggcacacaggtataacagctgg
gctgccgagagaaaagcaactggcgctacacctctaccaggaaaagaagatgaaattgct
tggagttctggcacagatagggaaaactgggaggcggagcaaagaaagcttgacagggag
tggtatggtctcgatgaaggttttgatgaaggacgagatccttttggagaaatgtcaaca
gaatatattaaaaaaagggaaagacaacttgaatcaagaaaaaacaaacgactcagtgct
caacaacgtcaaataaataaagacaatgaactttgggaaagaaatagaatgcttacgagt
ggtgtcgtccagtcggtggatctcgatgaagattttgatgaggaaaatgaagccagagtg
cacctccttgtgcacaatattgtaccaccgtttcttgatgggcggatcgtttttacaaaa
cagcctgagcctgtcgtcccggtcaaagacccgacatcagacatggctttagtttcaaga
aagggttcggcgcttgtaagggcatacagagagcagaaagaaaggcgaaaagcacagaag
aaacattgggaactggcgggcactacaatcgggaacataatgggaattaagaaaaaagac
gatagggaggaagacaaagctgaaggggaaccagacgctgattataaaactgggcaaaag
tttgccgaacacatgaaagacacgtcagccgcgactagtgaatttgctaggaaaaagacg
attcaagagcagagaaattatcttcctgtgtttgcatgcaggcaagagcttttgaacata
attagggagaattcgatcgtcattatagtcggtgagacgggttccgggaagacgacacag
ctaacccagtacctccatgaagacggctattctagatacggcatggttgggtgcacacag
ccgagaagggtcgccgccatgtcagttgccaaacgagtgtcagatgaaatggcatcaccg
ctcggtgacacagtcggctatgccatacgttttgaagactgtacttctgaaaatactgtt
ataaaatacatgacagatggtatattattgagagaatctttacgggaacctgaacttgat
aattatagcgccattatcatggatgaggcgcatgagagatcgttgaacaccgatgttctc
tttggcctgttacgtgaggtcgtagcaaagaggcaagacttaaaacttatagtgacatcg
gcaacgatggacgcttcaaagtttgctatgttctttgggaatgtgcctgtgtatacaatt
ccaggaagaacttttccagttgagttgtttttcagcaaaaaccccgttgaagattatgtt
gatgccgctgtgaagcaggcgcttcaaatacatttacaacctgttaaaggggacatattg
atttttatgcccggtcaggaggatatcgaagtgacatgtgaggttttggccgagcggctg
actgagatagaaaacgcacctccgctctcagtcctgcccatatactcgcaacttccctct
gaccttcaggccaaaattttccaagcgtcgcccgacgggatcaggaaatgtgtcgtcgcc
accaacatagcagaaacgtctcttacggttgacggtataatgtacgttgtcgactcaggc
tactgcaaactgaaagtgtacaatccaagaattggaatggacgctctgcagatatacccg
attagccaggccaattcgaatcagaggagcggacgtgccgggcgtaccggtcctggacac
gcatatagactgtatacagaaagacagtataaagatgaactccttgtgtctactgtacct
gaaattcaaagaaccaatttagcaaatactgttttgcttttgaagtcgctcggggtacaa
gatctcctccagttccattttatggatcctccaccacaggacaacatcctcaattctctt
tatcaattgtggattcttggggctttggatcacaccggcagtttaactccattaggaagg
caaatggccgagtttcccttggatcctcctcaatgtcagatgctgatagtttcaaacgaa
atgggttgtacggcagaaatcctcataattgtttcaatgctgtcggtcccgacaatattc
tacaggcctaagggtcgtgaggacgaggcagacagcgtgcgcgagaagttccaagtcccc
gagtcagaccacttgacttttctgaatgtctacatacaatggaaacagaacaagtattca
gcatcgtggtgcaatgagcatttcatacacgctaaagcgatgaagaaggtccgggaagtc
aggcagcagctcaaagacattctcgaccagcagaaaatggaaattatgtcatgcgggtcg
gattgggatattgtacgcaaatgtatttgttctgcgtattttcaccaagcagcaaggctt
aaaggaattggcgaatatgtacattgcagaactggaatgccttgtcatcttcatccgact
tcggccttgttcggaatgggcttcacgcctgattatgtcgtctatcatgaacttgttatg
acatcaaaggagtacatgcagtgcgtaacggctgtcgacggccactggcttgccgagctc
ggcccgatgttcttctccgtcaaagagactgggaggtcaggatcagccaggaggcgacag
gcactcgagcacctgcaggaaatggaggcccagatggccgctgctcaggaacagctgaga
caaagggaagaagacagggaaaggcgcgaatcgagggcggtaagcgtacgccaggtcata
gccacacctggcgccgctcaaaacaaaccgtatcgaaccccattgcgccttggaatgtaa
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integrated database retrieval system
