Cimex lectularius (bed bug): 106666143
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Entry
106666143 CDS
T05603
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
clec
Cimex lectularius (bed bug)
Pathway
clec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106666143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clec03019
]
106666143
Enzymes [BR:
clec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
106666143
Messenger RNA biogenesis [BR:
clec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106666143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
RRM_1
RNase_T
Motif
Other DBs
NCBI-GeneID:
106666143
NCBI-ProteinID:
XP_014248578
UniProt:
A0A8I6RV24
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MDVTKSNFKKLLPEILEAIDSSSFLAVDGEFTGLNNGHNITAFDTPKQYYSKIRSGALDF
LFVQFGLSVFKQVKGHERYKNKTYVFYLFPEPLNRDAPDCRFLCQASSLTFLAQNGFNFN
KLFREGIPYLKQSDEDSLRETLAEKSRIRANAVQSNNQTIPIPKQFQPAVDAAMEKIKVL
LSPNFDKEEVHVEKCSAFVRKLVYQTVREELSGKNICVETKNGTLVARRGVSQEQLHKEK
QEKAEKEEETIQDAVGFATIIRRIAASRKLIVGHNVLLDLCHMVHRFIDPLPEDYLEFKE
MLHTIFPKILDTKYLVSEALSDLIPSSHLPGVVEAIMKSPFELPKIDAEENYSYEIQNEK
FHNAGYDAYVTGLSFITALRYLDTSKFIKSPVDVGAIQKYLNKLFLMKIPDAYIDLERRD
PEPLRDHVFHVSFPKVWTSQNIVELFSPFGSIQINWLSDTTAWVALQDRSSASKVKECLE
DRPVSKSPGVIVKWYKRYSASTGTVASSPRPNKRKLSGSAPAITQKTLSTPLPPTGGEGD
RISKKRKSSSIELNIGTIFEETENGSEALMDLESCASAEGDKVNFTIDQDWD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggacgttactaagtcaaatttcaagaagctcctgcctgaaattttagaagcgatagac
tcttcgagttttttagcggtcgatggagagttcacgggtttgaacaatggccataacatc
actgcttttgatacgccgaaacaatactactctaagattcgttctggagcacttgacttc
ctgtttgtacagtttggcctatcagttttcaaacaagttaaaggacatgaacggtacaaa
aacaagacatacgtgttttatctatttcctgagcctttgaaccgagatgcgcctgattgt
aggtttttgtgtcaggcttcgagtctcacctttttggcccagaatggcttcaattttaat
aagcttttcagagaaggtattccgtatcttaaacagagcgatgaagactcactaagggag
accttggctgagaaatccaggattagagcaaatgccgtgcaatcaaacaaccagacgatt
cccattcctaaacaattccaaccagcagtggatgctgctatggaaaaaataaaagtatta
ttatcaccaaactttgataaggaagaagtgcacgttgaaaaatgttcagcatttgtaaga
aagttagtgtaccagacagttagagaagagttgagtgggaaaaatatatgtgttgagacg
aagaacggcacattagtcgcaagaagaggggtttcacaagaacagctgcataaagaaaaa
caagaaaaggccgaaaaggaggaagaaactatacaggatgcggttggttttgccactata
attagacggattgctgcatcgagaaagctgattgtaggacacaacgttctcctcgacctc
tgtcacatggtccatagattcatagaccctcttccagaggattatcttgaatttaaagaa
atgcttcataccatatttcccaagattcttgatactaagtacttagtgtcggaggcactg
tctgatttaattccttcctctcatttgccaggcgttgttgaagctattatgaaatctccc
tttgaactgcctaagatagatgcggaagaaaattactcttatgaaatccaaaatgagaag
ttccataatgctggatacgatgcttatgtcaccggcttgtcatttataactgccctcagg
tatttagatacaagtaaatttataaaatctcctgtggacgttggagcgattcagaagtac
cttaacaaattatttttaatgaaaatccccgatgcctatatagacttagaacggcgggat
cccgaaccactgagagaccatgtatttcatgtttcatttccaaaagtatggacttcccaa
aacattgtggagctttttagtccatttggttctatacaaatcaattggctttctgacaca
actgcctgggttgctctccaagaccgaagttctgcaagcaaagttaaagagtgcttagag
gacaggccggtttcaaaaagtcctggggtgattgtaaaatggtacaagaggtattcagct
agtacaggtacagtagcttcgtctccaagacctaataagagaaaattgagtggaagcgca
cctgctatcactcagaaaacgctttccacccctcttccgcctactggtggtgagggtgat
aggataagcaaaaagagaaaatcttctagcatagagctcaacattggtacgatatttgag
gaaacagaaaatggatcagaagctctcatggacttggagagttgtgccagtgccgaagga
gacaaagtgaatttcaccattgaccaggactgggattaa
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