Cimex lectularius (bed bug): 106666507
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Entry
106666507 CDS
T05603
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 1-like
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
clec
Cimex lectularius (bed bug)
Pathway
clec03013
Nucleocytoplasmic transport
clec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106666507
03015 mRNA surveillance pathway
106666507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clec03019
]
106666507
Enzymes [BR:
clec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106666507
5.6.2.5 RNA 5'-3' helicase
106666507
Messenger RNA biogenesis [BR:
clec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106666507
mRNA cycle factors
Common to processing body (P body) and stress granule
106666507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
UvrD-helicase
DEAD
SLFN-g3_helicase
NAT10_TcmA_helicase
ATPase
NPHP3_N
nSTAND3
SRP54
AAA_16
AAA_32
AAA_22
Motif
Other DBs
NCBI-GeneID:
106666507
NCBI-ProteinID:
XP_024085506
UniProt:
A0A8I6STU2
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MSVDAYGPSSQTLTFLDTEENDIIGADTQGSQYDFTDFTLPSQSQTQPSQLDVGAGQIQV
NGKLNIDIDGVVSATAQKLGELQFEEEEEDAFYNKELPLYACKYCGIHDPSCVVMCNVCK
KWFCNGRGNTSGSHIINHLVRAKHKEVTLHKDGPLGETILECYSCGVRNVFVLGFIPAKA
DSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLISDRCFLSWLVKVPAEQDQLRARQVNGTQ
IAKMEELWRDNADATFSDLEKPGVDEEPQQVLLRYEDGYQYQTNGXNIFGPLVKLEADYD
KRLKESQTQENVEVRWDVGLNKKIIAYFTLAKSDGDMKLMHGDELRLRYLGEMHKAWSGV
GHVIKIPDNYGEEVGIELKSTVGAPTDCTSNFVVDFIWKSTSFDRMQFALRKFAVDDVSV
SAYIYHRLLGHDVEDMLFRVHLPKHFSAPNLPDLNRSQVYAVKHTLQRPLSLIQGPPGTG
KTVTSATIVFQLVKQNGGPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVS
FLALHNQIRKMDCNTELQKLQQLKDETGELSSVDEKRYRMLKKSSEKELLDAADVICCTC
VGAGDPRLIRLKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKASR
AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVSADERKLSKVEF
PWPVPDKPMLFYVTQGQEEIAGSGTSYLNRTEASNVEKMTTRFLRAGVKPEQIGVITPYE
GQRAYLVQYMQYQGALHSKLYQEIEVASVDAFQGREKDLIIMSCVRSNEHQGIGFLNDPR
RLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLNFYKEQKVLVEGPLNNLKESQIQFSKPK
QIVNTANPGTHFMSTTVYDAREAMVPGSIYDRSSGSNNPSHYYPRPPAGSGMDLFSRPHD
PISYISADRAQAAISNMPVPLGMFMNMTHVPPRFYNQHQQALQARQNQRGGRLGSGRVRN
KGINVKNKLAALSQSNSQDITQPYSQGITQAMSQGMSQPGLSLSQAGLSQAELSQESYLV
GEFPSQVDGLLSQDSTYQGERSSFYTPPNPHFSQPY
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggacgcttacgggccgagttcgcagacgttgacttttctggacacagaggaa
aacgacataatcggagccgacactcaagggtcacagtatgatttcacggattttacacta
ccctcacaaagccagactcagccgtcgcagttggacgtcggagccggtcaaatccaggtc
aatgggaaactcaacatagacattgatggtgtggtatctgccacagcacagaagctagga
gaacttcagtttgaggaggaggaggaagatgccttttacaataaagaattgcctctttac
gcttgtaaatactgcggaatccatgatcctagttgtgttgttatgtgtaatgtctgtaaa
aaatggttttgtaatggtcgtgggaatacatcaggatcccacataatcaaccatcttgtt
agggcaaagcataaggaagtaactcttcacaaggatggaccactaggtgaaactatatta
gaatgctattcttgtggtgtaaggaatgtttttgtgttgggatttattccggcaaaggca
gattcggttgtggtgctcttatgccgccaaccttgtgcagcgcaaaactccttgaaagat
atgaactgggatcaagagcagtggaaaccgttaatttctgacaggtgctttttatcatgg
ctcgttaaagttcctgcagagcaggatcaattacgagcgagacaggtcaatggaactcag
atagccaaaatggaagaactttggagagacaacgcagatgcaacattttcagaccttgaa
aagccaggtgttgatgaagaacctcagcaagtccttttaaggtatgaagatggttatcaa
tatcaaacaaatggttagaacatttttggccctcttgtcaaactggaagctgattacgac
aaaagattgaaagaatcccagactcaagagaatgttgaagtcagatgggatgtggggctt
aacaagaagatcattgcatattttaccctagcaaaatctgatggagatatgaaattaatg
cacggagacgaattgagattgcgttatttgggtgaaatgcacaaagcttggtctggagtc
ggccatgtcataaagattccagacaattatggggaagaagtgggaattgaattgaaatcg
actgtaggagctccgaccgattgcacatcaaattttgttgtcgacttcatatggaaaagc
acaagctttgatagaatgcagttcgctctgaggaaatttgctgtagacgatgtctcagtc
tctgcttacatttaccatcggttgctgggccatgatgttgaagatatgctttttagagtg
catttaccaaaacatttctcagcccctaatcttcccgatcttaatcgatcacaagtttat
gcagttaagcatacgcttcaaaggccgctttccttgatccaaggtcctccaggtacagga
aagacagtaacctctgccaccatagtgtttcagcttgttaaacaaaacggcggccctgtg
ctagtatgtgctccatcaaatattgctgtcgaccaattaactgaaaaaatccatagaacg
ggattgaaggttgtcagagtttgtgcaaagtctcgggaggcgatagattcaccggtgtct
tttctagcccttcataatcaaattcgtaaaatggactgcaatacagaacttcagaagctg
cagcagctgaaggatgagactggagaattatcttctgttgatgaaaagagatatcgaatg
ttgaaaaaatcttctgaaaaagagctcctcgatgctgctgatgtcatttgttgtacttgt
gtcggagcaggggatccaaggttaataaggctcaagtttcattcaatccttattgatgag
agtatgcaagcgacagaaccagaatgtatggtaccagttattcttggggctaaacagtta
attttagtcggagatcactgccaattagggcctgtagtcatgtgcaaaaaagcttcacgt
gctgggttgtctcagtcattatttgagaggctagttgttcttggtatacgaccttttagg
ttagaagtacaataccgtatgcaccctgagctctcaaggtttccttctaatttcttttat
gagggatctctacagaatggtgtcagtgcagatgaaagaaaactgtcaaaagttgaattt
ccttggcctgtacctgacaaacccatgctgttttatgtgacacaaggtcaggaggaaatc
gccggatctggaacctcatatttaaacaggactgaagcttcgaatgtcgagaaaatgacg
actaggtttcttagagctggagtcaagccagagcagataggagttataacaccttacgaa
ggccaaagagcttatcttgtgcaatacatgcagtatcaaggagcacttcactcaaaactt
taccaagaaattgaagttgccagtgttgatgcttttcagggtagagaaaaagatttaata
attatgtcttgtgtgagatcgaatgaacatcaaggtatcggctttctaaatgaccctagg
agattaaatgtagctctaacaagagctaaatatggcattattattgttggaaatccaaaa
gtactttccaagcaacctttatggaatcacttattgaatttttacaaagagcagaaagtg
cttgtagaaggtcctctaaataatttgaaggaatcacaaattcagttttcaaagccaaag
caaatagtcaacactgccaatcctggaacgcattttatgtcgactacagtttatgatgcc
cgtgaagcaatggtgcccggtagtatctatgacagaagtagtggttcaaataatccttca
cattattatcctaggccaccagccggtagtgggatggacttgttctctagacctcatgac
cctattagttatatatctgcagaccgagctcaagcagcaatatctaacatgcctgttcca
ctgggaatgtttatgaacatgactcatgtccctccacgtttctacaatcagcaccaacaa
gcactccaagcaaggcaaaatcaaagaggcggaaggttaggaagtggacgtgttcgtaac
aagggaattaacgttaagaataaattagctgctcttagccaaagcaatagtcaggatatt
actcagccttacagccaaggaattactcaggccatgtctcagggtatgtctcaacctgga
cttagtttatctcaagctggcttatcccaagcggaactttctcaagagtcgtatttggtg
ggtgagtttccatctcaagtagatggtcttctttctcaagattcgacataccaaggcgag
aggtcgtctttctacactccaccaaatcctcatttttcgcagccttattga
DBGET
integrated database retrieval system
