Cimex lectularius (bed bug): 106667312
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Entry
106667312 CDS
T05603
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
clec
Cimex lectularius (bed bug)
Pathway
clec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106667312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clec03021
]
106667312
03019 Messenger RNA biogenesis [BR:
clec03019
]
106667312
Transcription machinery [BR:
clec03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106667312
Messenger RNA biogenesis [BR:
clec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
106667312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
Pcf11_helical
zf_PCFS4
Pcf11_C
Pfc11_Clp1_ID
zf_UBZ
HEAT_MROH2B_C
Motif
Other DBs
NCBI-GeneID:
106667312
NCBI-ProteinID:
XP_014250672
UniProt:
A0A8I6RSC1
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MAKDIAEEFNASLSDLRINSKPHINMLTMLAEDYIEHAPVIVSAVETHLHRVRDDVKLPV
LYLVDSIVKNVGKDYISLFTENIVTTFCTVFARVDEKVRSQMFKLRQTWNTIFPVKVMYD
LDTQVKTLDPAWPITATSPSVRIHVNPKFFQMQSDGDVMREELLKQQKELLELQKRKVEL
ELLQTKAILEEQQKKLENKTDTLVKEVQANMEKVVPKVSRDPRLKAKPKGEEKSPRKRKS
KDKRKENHKKQQRQLPARSAPLKPLEVETNEKIEDEKHKEKEPMETDPVKIPDDHCDSTR
DGFATTKRKIEDDKKDKELDSIEQLFGDEDVDLRQIAIIPDYTEGKCWATIKKSRPEVKK
FKKSRSFNFNNEDEDSEEPQEDNSNLIIKQAEEQLNEGNITFSQYNHMLKEVITMNEEKK
LKEAVLKDKEEPRKKYETEGPEFDDKRRFSQREWRRPIKRVFNRWAPQKNYRFNNFRCRE
VPPADPHVLDIIAKDTMHTIDIDRIPHQVRYYGETAVILLSWDDPRELTFQPGNGRILIN
DKVLVLPFNAPYREVNIEGVSTKIRFGAPTRELFIDGIFYEASFGGPPVQVMIGNRYHSF
QLLGPMPQVRVGTTPRTDLVAGKVNLIVDAKHIFPIYLDAKPQRFDIGHVPYILRFVEAL
RTVVINGVPFNIEFGGNLPVPMYFHGEKHFLRFSVLPPGVKQGYVNIINMEGGRLPTPPL
AMMAPPPPPPQITPVLQEYCTAPSEDLELLVSRLTTTSQPRSQYSVKANEPKENSVINVS
ELLKKLVEVGIVPPVQEEKEKVKQVDFSKPDSLKTNQPGLIAILYSGIQCSSCGVRFPPE
QTVKYSQHLDWHFRQNRRDRDTLRRVQSRKWNYDITDWIQYQEIEEEEERPESWFEIQER
ETAAASEVEQESSVPVIDDNNSCSVCGDRFDQFYNGDKEEWQLKNAMRLENSLYHPLCYK
EHDFNSDAIEIEVKEDRETNQDDDDDDILEIKVLEKTVEFYELSDEEGPTSPAKKEDSDD
EVHFSLNRVKQEKIEIQPAPVVTSSIDGNNELAESTPLVVPKKIKINITSSLSKQDRSAK
KVEEKESESDEEINFPSSVKPDIAKAQLTVLDPLSIGTEISALCSIM
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagacatagctgaagagttcaacgcgtcactgtctgatctgaggatcaacagc
aagccacacatcaacatgctgaccatgctcgcggaagactacatagagcacgccccggtg
atagtgagtgcagtcgagacccacctccacagggtgagggacgacgtcaaacttcccgtc
ctctacctagtcgactctatagtcaagaacgtcggtaaagactacatatcactgtttacg
gagaacatcgtgacgacattctgcacggtgtttgcccgtgtcgatgagaaggtccgatcg
cagatgttcaagctgaggcagacttggaatactatattcccggttaaggtgatgtatgac
ttggacacgcaggttaaaacgctcgacccggcttggccgatcactgccacctcgccttcc
gtgcggatccacgtcaacccgaaattcttccagatgcagagtgatggcgatgtgatgcgg
gaggaactgttaaaacaacaaaaggaacttcttgagcttcagaagcgcaaggttgaactc
gagctactccaaacaaaggcgatactcgaggaacagcagaagaaattggaaaataagacg
gacactcttgtcaaagaggtccaggcgaatatggagaaggttgtacccaaggtgtccagg
gatcctaggctcaaagcaaagcccaagggtgaagagaagtccccgaggaagagaaagagc
aaagacaagagaaaagagaaccacaagaaacaacaaagacagcttccggcacgttccgcc
cctctcaaacccctcgaagtcgaaaccaatgagaaaatcgaagatgaaaagcacaaggaa
aaagaaccgatggaaaccgacccggtcaagatccccgacgatcattgcgactcgactcga
gacggttttgcgactacaaaaaggaaaatcgaagatgacaaaaaagacaaagaattagac
tcgatcgagcagttattcggtgatgaagacgtcgatctccgtcagattgcaataataccg
gactacactgaaggcaaatgctgggcgactataaaaaagagccgtcctgaagttaagaag
ttcaaaaagtcacggtcgttcaatttcaacaatgaagacgaagactccgaagaacctcag
gaggacaattcgaatttgataataaaacaagcggaagaacagttgaatgaaggtaacata
actttttcacagtataaccatatgttgaaagaagtcataacgatgaatgaggagaagaag
ttgaaagaggctgtattgaaggataaagaggaaccaaggaagaagtacgagacggaaggt
ccggagttcgatgataaaagacgcttctcacagagggaatggagacgaccgataaagcgc
gtcttcaaccggtgggcaccacagaagaactacaggttcaacaatttccgctgcagggaa
gttccaccagccgatccacacgtcctcgatataatcgcaaaagacacgatgcataccatc
gacatcgacaggataccacatcaggtcagatactacggcgagactgcagtgatccttctt
tcctgggatgatccgagagagctgacgttccagccgggcaatggccggatactcatcaac
gacaaagtcctcgtgctccctttcaacgcgccgtaccgtgaggtcaacatagaaggtgta
agcactaaaataagatttggcgctccaacccgtgagttattcattgatggtatattctat
gaggcgagcttcggtggtccgcccgtgcaagtcatgatcggaaatcgttaccactcattt
cagcttttagggcctatgccacaggtcagagttggtacgaccccacgcactgacctcgta
gctgggaaagtcaatttaatagtcgacgcaaagcatatttttccgatttatttagacgcc
aagccgcagaggttcgatatcggccatgtaccttacatacttcgttttgtcgaagcactt
cgcaccgttgtaatcaatggggtacctttcaacatagaattcggtggtaatttgcccgtt
cctatgtatttccatggtgagaagcactttttaaggttctccgtccttcctcctggcgtc
aaacagggttatgttaatataataaacatggaaggtggcaggctgccgacaccaccactc
gcaatgatggcgcctcctccccctccccctcagataactcctgtgttgcaggaatactgt
acagcaccgtctgaagacttagaactcctcgtgagccggcttacgacgacgtctcagccc
aggagccagtattcggtaaaggcgaacgaaccaaaagaaaattctgtgataaacgtaagc
gagcttttaaagaaattggtcgaagtcggaatcgtaccgcccgtacaggaggaaaaggag
aaggtgaagcaagtggatttttcaaaaccggacagcttgaagacaaatcagccaggttta
atcgcaatactctattcggggatacagtgcagttcctgtggcgtacgattcccgcctgaa
cagacggtcaaatacagccaacacctcgactggcacttcaggcagaataggcgagacagg
gatacgctgcgccgtgtccagtcgcgcaagtggaactacgacataaccgactggatacaa
taccaggagatcgaggaggaggaagaacggcccgagagctggtttgaaatacaagaacgc
gagacggccgcagcctccgaggtcgaacaggaatcctctgtgcctgtcatagatgacaac
aactcctgcagcgtatgcggcgacaggttcgaccagttctacaacggtgataaagaagaa
tggcagttaaagaacgcaatgcgcctcgaaaattccctctaccatcctttatgctacaaa
gagcacgatttcaattcggacgcaattgaaatcgaagtcaaagaggatcgagaaacaaac
caggatgacgacgacgacgacatcctcgagatcaaagtgttagagaaaactgtcgagttt
tatgagctttctgacgaagaagggccgacttcgccggccaaaaaggaagattcggatgac
gaagtccatttctcgctcaatagggtgaaacaggaaaagatcgagatacaacctgcgcct
gtcgtaacatcgtcgattgatgggaacaacgagctagctgaatccaccccgctagtcgta
cctaagaagatcaagatcaacataacgtcctcgctctcgaaacaggacagatcggcgaag
aaggtcgaggagaaggaatcggagagcgatgaagagatcaatttcccttcttcagtcaaa
ccagacatcgctaaggcgcagcttaccgttttagatccactgtccatcgggacagaaata
tcagccctctgtagcataatgtaa
DBGET
integrated database retrieval system
