KEGG   Cimex lectularius (bed bug): 106670622
Entry
106670622         CDS       T05603                                 
Name
(RefSeq) pre-mRNA-splicing factor SYF1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
clec  Cimex lectularius (bed bug)
Pathway
clec03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106670622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clec03019]
    106670622
   03041 Spliceosome [BR:clec03041]
    106670622
Messenger RNA biogenesis [BR:clec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     106670622
Spliceosome [BR:clec03041]
 Complex B
  Other components
   Prp19-related factors
    106670622
 Complex C
    106670622
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_2 TPR_12 TPR_15 TPR_8 ARM_TT21_C PPR TPR_10 NRDE-2 DHR-2_Lobe_A RPN7 ARM_TT21 DUF5575_C TPR_1
Other DBs
NCBI-GeneID: 106670622
NCBI-ProteinID: XP_014256607
UniProt: A0A8I6S210
LinkDB
Position
Unknown
AA seq 863 aa
MPILEEKRLKIIFTEDDLPYEEEILRNPYSIKHWLRYIEFKKDAPKHGVNIIYERALKEL
PGSYKLWYNYLKLRKKQIKGRCITDPCYEHLNNTFERALVYMNKMPRIWMDYCQFMVDQC
KITRTRIVFDRALRSLPITQHRRIWPIYIKFLKKYNIPETAVRVFRRYLKLCPEDAEEYI
DYLISVGRLDEASVRLADIVNSDEFVSKHGKSNHQLWTELCELISKNPQDMKTLNVDAII
RSGLKKYTDQLGRLWNSLADYYIRSGLFEKARDIYEEAIQTVTTVRDFTQVFDAYAQFEE
LSLSKKMEEVSEKLAPSEDDDIEIELRMARFEDLIERRLLLLNSVLLRQNPHNVHEWLKR
VQLFEGKPHDIINTYTEAVQTVDPKQAVGKPHTLWVAFAKFYEENGQIEDSRIVMEKGTQ
VAYTKVDDLASVWCEWAEMEIRNDNYEEALKLLQRATVMPSRKVDYHDETETVQMRLYKS
LKLWSMYADLEESFGTFKSCKAVYDRIIDLKIATPQIIINYGIFLEEQNYFEEAFRAYEK
GIALFKWPNVYDIWNTYLTKFLARYGGSKLERTRDLFEQCLENCPPKFAKALFLLYAKLE
EEHGLARHAMAVYERATSAVLPEEMFEVFNIYIKKAAEIYGIPKTRQIYEKAIEVLTEQN
AREMCLRFAEMETKLGEIDRARAIYAHCSQMCDPRVTSGFWQTWKDFEVRHGNEDTMREM
LRIKRSVQATYNTQVNMMSAQMLSAASNMSGTVSDLAPGAKDDMRLLEAKAAEMAEGRGQ
PSNLSSGIMFVRGETQVQTKGGIALQNEKKTNPEEVDISSALESSDEEGANEDDRGDDDL
PIQKQIIPDEVFGSLKPKDEDSD
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgccgattttagaagaaaagagattgaaaataatatttactgaagatgatctaccatat
gaagaggaaattttacgaaatccatattcaataaaacactggctaaggtatattgagttt
aaaaaagatgcacctaagcatggtgtgaacataatttatgaaagagctttgaaagaactc
ccaggaagctataaattatggtacaattatttaaaattgaggaaaaagcagattaaagga
cgttgcatcactgacccttgttatgaacatctcaacaacacgtttgaaagggctttagtt
tatatgaataagatgccaagaatttggatggactattgccagtttatggtcgaccagtgt
aaaattacaagaacacggattgtgttcgaccgtgcgcttaggtcactcccaataacacaa
cacaggaggatatggcctatttacatcaaatttttaaaaaagtacaacattcccgagaca
gctgtgagggtcttccggagatatctgaaactgtgcccagaggatgcggaagaatatata
gattatctaataagtgttggcaggcttgatgaggcatcggtgagacttgctgacattgtc
aatagcgatgaatttgtttctaagcatgggaaatcaaaccaccaactttggactgaactt
tgtgaacttatttctaaaaatcctcaagatatgaaaacattaaacgtagatgcaattata
agaagtggacttaaaaaatacacagaccagcttggtagactatggaattctttagctgat
tactatatcaggagtggtttatttgaaaaggcacgtgatatttatgaagaagctattcag
acagttacaactgttcgggacttcacccaggtgtttgatgcttatgctcaatttgaagag
ctttcacttagtaaaaaaatggaagaagtttctgaaaaattagccccttcagaggatgat
gacattgaaattgagttaaggatggcaaggtttgaagacttgatagaaaggcggctgctt
cttctcaactcagtcctcttgaggcaaaatccacacaatgtacacgagtggctgaaaaga
gttcaacttttcgaagggaaaccccatgatattataaacacatacactgaagccgttcag
acagtagatccaaaacaagctgtcgggaagccgcacactctgtgggtagcatttgcaaaa
ttttacgaagaaaatggccaaatcgaagattccaggatcgtgatggagaaagggacacaa
gtcgcttatacaaaagttgatgatttggcatctgtctggtgtgaatgggctgaaatggaa
ataagaaacgacaattatgaagaagctttaaagttactccaacgagccacagttatgcct
tctagaaaagttgactaccacgatgaaacagaaactgtccagatgaggctttataaatct
ctaaaactatggtctatgtatgccgatttagaagaaagctttggcacttttaagtcttgc
aaagcggtatatgatagaataatagatttgaagattgcaacaccacaaatcattatcaat
tatggtatatttctagaggagcaaaattacttcgaagaagcatttagggcatatgaaaaa
ggaattgctttgttcaagtggccgaatgtgtacgatatttggaacacataccttacaaag
tttcttgcaaggtatggagggagcaaattggaaagaacgagggatctttttgagcaatgt
cttgaaaactgtcctcctaaatttgccaaagctctgttccttttatatgcgaaactggaa
gaggaacatggtttggcaaggcatgcaatggctgtttacgaaagggccacatcagctgtc
ctccccgaagaaatgtttgaggtttttaacatttacattaaaaaagcagctgaaatatat
ggtatacctaagacaaggcagatttatgaaaaggctattgaagtgctcactgaacaaaat
gctagagagatgtgcctcagatttgcagaaatggaaacaaaattaggtgaaatagacagg
gcaagagccatttatgctcactgcagtcagatgtgtgaccctagggttacaagtggtttc
tggcagacctggaaggatttcgaagtgcgacatggcaatgaagacacaatgagggagatg
ctgaggataaaacgaagtgtccaagcaacatacaacacacaagtcaacatgatgtcagcc
cagatgctgtctgctgctagcaatatgtcagggacagtatcagacctcgcaccaggcgcg
aaagatgacatgaggcttttagaggccaaggccgcagaaatggccgagggcagaggccaa
ccgtcaaatctcagctcaggaatcatgtttgtccgaggtgaaacccaagtacaaactaaa
ggaggtattgcgcttcaaaatgaaaagaaaaccaaccccgaggaagtggacatttcttcc
gctctcgaatcaagtgatgaggaaggcgctaacgaagacgatagaggagatgatgatctt
cctattcaaaagcaaatcatccctgatgaagtttttggaagcttgaaacctaaagatgaa
gacagtgattaa

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