Cimex lectularius (bed bug): 106670622
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Entry
106670622 CDS
T05603
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
clec
Cimex lectularius (bed bug)
Pathway
clec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106670622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clec03019
]
106670622
03041 Spliceosome [BR:
clec03041
]
106670622
Messenger RNA biogenesis [BR:
clec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106670622
Spliceosome [BR:
clec03041
]
Complex B
Other components
Prp19-related factors
106670622
Complex C
106670622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_12
TPR_15
TPR_8
ARM_TT21_C
PPR
TPR_10
NRDE-2
DHR-2_Lobe_A
RPN7
ARM_TT21
DUF5575_C
TPR_1
Motif
Other DBs
NCBI-GeneID:
106670622
NCBI-ProteinID:
XP_014256607
UniProt:
A0A8I6S210
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MPILEEKRLKIIFTEDDLPYEEEILRNPYSIKHWLRYIEFKKDAPKHGVNIIYERALKEL
PGSYKLWYNYLKLRKKQIKGRCITDPCYEHLNNTFERALVYMNKMPRIWMDYCQFMVDQC
KITRTRIVFDRALRSLPITQHRRIWPIYIKFLKKYNIPETAVRVFRRYLKLCPEDAEEYI
DYLISVGRLDEASVRLADIVNSDEFVSKHGKSNHQLWTELCELISKNPQDMKTLNVDAII
RSGLKKYTDQLGRLWNSLADYYIRSGLFEKARDIYEEAIQTVTTVRDFTQVFDAYAQFEE
LSLSKKMEEVSEKLAPSEDDDIEIELRMARFEDLIERRLLLLNSVLLRQNPHNVHEWLKR
VQLFEGKPHDIINTYTEAVQTVDPKQAVGKPHTLWVAFAKFYEENGQIEDSRIVMEKGTQ
VAYTKVDDLASVWCEWAEMEIRNDNYEEALKLLQRATVMPSRKVDYHDETETVQMRLYKS
LKLWSMYADLEESFGTFKSCKAVYDRIIDLKIATPQIIINYGIFLEEQNYFEEAFRAYEK
GIALFKWPNVYDIWNTYLTKFLARYGGSKLERTRDLFEQCLENCPPKFAKALFLLYAKLE
EEHGLARHAMAVYERATSAVLPEEMFEVFNIYIKKAAEIYGIPKTRQIYEKAIEVLTEQN
AREMCLRFAEMETKLGEIDRARAIYAHCSQMCDPRVTSGFWQTWKDFEVRHGNEDTMREM
LRIKRSVQATYNTQVNMMSAQMLSAASNMSGTVSDLAPGAKDDMRLLEAKAAEMAEGRGQ
PSNLSSGIMFVRGETQVQTKGGIALQNEKKTNPEEVDISSALESSDEEGANEDDRGDDDL
PIQKQIIPDEVFGSLKPKDEDSD
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgccgattttagaagaaaagagattgaaaataatatttactgaagatgatctaccatat
gaagaggaaattttacgaaatccatattcaataaaacactggctaaggtatattgagttt
aaaaaagatgcacctaagcatggtgtgaacataatttatgaaagagctttgaaagaactc
ccaggaagctataaattatggtacaattatttaaaattgaggaaaaagcagattaaagga
cgttgcatcactgacccttgttatgaacatctcaacaacacgtttgaaagggctttagtt
tatatgaataagatgccaagaatttggatggactattgccagtttatggtcgaccagtgt
aaaattacaagaacacggattgtgttcgaccgtgcgcttaggtcactcccaataacacaa
cacaggaggatatggcctatttacatcaaatttttaaaaaagtacaacattcccgagaca
gctgtgagggtcttccggagatatctgaaactgtgcccagaggatgcggaagaatatata
gattatctaataagtgttggcaggcttgatgaggcatcggtgagacttgctgacattgtc
aatagcgatgaatttgtttctaagcatgggaaatcaaaccaccaactttggactgaactt
tgtgaacttatttctaaaaatcctcaagatatgaaaacattaaacgtagatgcaattata
agaagtggacttaaaaaatacacagaccagcttggtagactatggaattctttagctgat
tactatatcaggagtggtttatttgaaaaggcacgtgatatttatgaagaagctattcag
acagttacaactgttcgggacttcacccaggtgtttgatgcttatgctcaatttgaagag
ctttcacttagtaaaaaaatggaagaagtttctgaaaaattagccccttcagaggatgat
gacattgaaattgagttaaggatggcaaggtttgaagacttgatagaaaggcggctgctt
cttctcaactcagtcctcttgaggcaaaatccacacaatgtacacgagtggctgaaaaga
gttcaacttttcgaagggaaaccccatgatattataaacacatacactgaagccgttcag
acagtagatccaaaacaagctgtcgggaagccgcacactctgtgggtagcatttgcaaaa
ttttacgaagaaaatggccaaatcgaagattccaggatcgtgatggagaaagggacacaa
gtcgcttatacaaaagttgatgatttggcatctgtctggtgtgaatgggctgaaatggaa
ataagaaacgacaattatgaagaagctttaaagttactccaacgagccacagttatgcct
tctagaaaagttgactaccacgatgaaacagaaactgtccagatgaggctttataaatct
ctaaaactatggtctatgtatgccgatttagaagaaagctttggcacttttaagtcttgc
aaagcggtatatgatagaataatagatttgaagattgcaacaccacaaatcattatcaat
tatggtatatttctagaggagcaaaattacttcgaagaagcatttagggcatatgaaaaa
ggaattgctttgttcaagtggccgaatgtgtacgatatttggaacacataccttacaaag
tttcttgcaaggtatggagggagcaaattggaaagaacgagggatctttttgagcaatgt
cttgaaaactgtcctcctaaatttgccaaagctctgttccttttatatgcgaaactggaa
gaggaacatggtttggcaaggcatgcaatggctgtttacgaaagggccacatcagctgtc
ctccccgaagaaatgtttgaggtttttaacatttacattaaaaaagcagctgaaatatat
ggtatacctaagacaaggcagatttatgaaaaggctattgaagtgctcactgaacaaaat
gctagagagatgtgcctcagatttgcagaaatggaaacaaaattaggtgaaatagacagg
gcaagagccatttatgctcactgcagtcagatgtgtgaccctagggttacaagtggtttc
tggcagacctggaaggatttcgaagtgcgacatggcaatgaagacacaatgagggagatg
ctgaggataaaacgaagtgtccaagcaacatacaacacacaagtcaacatgatgtcagcc
cagatgctgtctgctgctagcaatatgtcagggacagtatcagacctcgcaccaggcgcg
aaagatgacatgaggcttttagaggccaaggccgcagaaatggccgagggcagaggccaa
ccgtcaaatctcagctcaggaatcatgtttgtccgaggtgaaacccaagtacaaactaaa
ggaggtattgcgcttcaaaatgaaaagaaaaccaaccccgaggaagtggacatttcttcc
gctctcgaatcaagtgatgaggaaggcgctaacgaagacgatagaggagatgatgatctt
cctattcaaaagcaaatcatccctgatgaagtttttggaagcttgaaacctaaagatgaa
gacagtgattaa
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