KEGG   Cimex lectularius (bed bug): 106670780
Entry
106670780         CDS       T05603                                 
Name
(RefSeq) exosome component 10 isoform X1
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
clec  Cimex lectularius (bed bug)
Pathway
clec03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:clec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106670780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clec03019]
    106670780
Messenger RNA biogenesis [BR:clec03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     106670780
SSDB
Motif
Pfam: WDR55 DNA_pol_A_exo1 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_2nd PMC2NT Beta-prop_EML_2 HRDC Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_2nd ASA1 NBCH_WD40 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_NOL10_N DSE1_N WD40_like Beta-prop_DCAF4 CPSF_A WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_VPS8 WD40_RFWD3
Other DBs
NCBI-GeneID: 106670780
NCBI-ProteinID: XP_014256853
UniProt: A0A8I6S2B5
LinkDB
Position
Unknown
AA seq 928 aa
MDDALVQEGDILPGCANFEEFVQAAYPIVMNGVRLSNNLPSTQQYSYFKTYKEFEDIMKA
HGKRLQDTIQMLLVHMDTKRTIHHQPADEKFELIVDTNDKLLDRAHKSMSEMDGTRFNPD
EDFGESSHRQISGSWNRKNLDSVKLADKADDVVKLTVQQRTIRPQALFKDKIDNSNRPWE
PRIKEKPNALKPLSVLLTVNERGQETYTHPYEFELDMWKPSEERLTLVHVVEEPKDLEET
QLIYVQTEKELELMVADLLQQNEFSVDLEHHSYRSFMGFTCLMQISTKDTDFIIDALKLR
HKMHILNTVFTKPNILKIFHGASNDIDWLQRDFSLYVVNMFDTYQAAKVLDFPKLSLAYL
LKHYCKIEASKKFQLYDWRIRPLPNKAKNYAREDTHYLIYIYQMMNNELFAKGNGPRLID
VVYKKSIETCKQVYMKPLLDENSHMNLYRRMGRPFDTRQLFALKEIYKWRDNVAREEDES
PGYVLSNHMMMQMAQTLPREVQGILACCNPIPPLVRQHAVDIHKIILKAKEVPLVKEDSE
VSCESEGETEEEEPDTSDEDWEAGEDESDSSGAESAAEDEFVVAAIKKRQRIDKSKPPYI
NIEDAINDSSFSPENDIIVLATSAGDLLPFTYGLNACNGLGRIEAHTDDCRVVEFSSDGG
RLFSGGKDKTVVVSDLERRDMISFYQDAHDEPVSALTVLDDNLICTGDDGGNLKIWDLRE
RKSVASNKPRDISDYISSVVYKEGSNFVSCTSGEGNLTIYDLKRLTICSQSEHHKSDLTC
SVLIKREDEIVCGSLTGEMIMYKWAGTAEPLGKYDPVPKTPVNCMLAVSENLIITGWEDK
KIRAFHLYPNEEVGIVGQHDMPVEGLEMSRDGDLIASTSAENKLKFWNIGYLEDYEANKR
KKKKKGRQSVNLPSSAVEDRGSFFSELL
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggacgacgccctggtacaggagggcgacatcctccccggctgcgccaacttcgaggaa
ttcgttcaggctgcatacccaatcgtcatgaatggtgtacgcctttcgaacaacctgccc
agcacgcagcagtacagctatttcaagacttacaaggagtttgaagacattatgaaggcc
catggcaaacgccttcaggatacgatccaaatgcttttggtgcatatggacacaaagagg
acaatccaccatcagccagctgacgagaagttcgagctgattgtcgacacgaacgacaag
cttcttgatagggcgcacaaatcgatgtcggagatggatgggacgaggttcaacccggac
gaagacttcggcgagagtagccatcgccagatatccggcagttggaacaggaagaacctc
gattcggtcaaattggctgataaggcggacgacgttgtcaagctgacagtgcaacaacgc
acgataaggccacaggcgctgttcaaagacaagatagacaacagtaaccggccttgggag
ccgaggatcaaggagaagcccaacgccctcaagcccctatcggtcctgctcacggtgaac
gaaagaggacaggagacgtacactcacccgtacgagttcgagctcgacatgtggaagcca
agtgaggaacgcctcacgcttgtacatgtggtcgaagagcccaaagacctcgaagagacc
cagctcatttacgtccaaacggaaaaagagctcgagctcatggtcgccgatctactccag
cagaatgaattcagtgtcgatcttgagcatcactcgtaccggagtttcatgggttttacc
tgtttgatgcagatatcgaccaaagatacagacttcatcatcgacgcattgaaattgagg
cataaaatgcacattcttaatactgtttttaccaagccaaacatattaaaaatttttcat
ggtgcaagtaatgacatcgactggctccagagagatttcagcctctatgtcgtgaacatg
ttcgacacataccaggcggcgaaggttctcgatttcccaaagctcagcctcgcgtacctc
ctcaaacactactgcaagattgaagccagcaaaaagttccagctgtacgactggcggata
cgtccactgccgaacaaagcgaagaactatgcccgtgaggacacacactacctcatctat
atataccagatgatgaacaacgagctgttcgccaagggcaatgggcctcgtctcatagat
gttgtttacaagaaaagcattgagacttgcaaacaggtctacatgaagccactcctcgac
gagaacagtcacatgaacctttacaggcgtatggggcgcccttttgacacaaggcagctt
ttcgccctgaaagagatctacaaatggagggacaatgttgcacgcgaggaagacgaaagc
cctgggtacgtcctttcgaaccacatgatgatgcagatggcgcagacgttgccgagggag
gtgcagggtatcttggcatgctgtaacccgataccaccgctcgtgagacagcatgcggtt
gacatacacaagatcatactgaaggcgaaggaggtcccgcttgtcaaggaagactcggaa
gtgagctgcgagagcgagggggagacggaggaagaggagccggacacgtccgacgaagac
tgggaggccggggaggacgagagcgattcgtctggggcggagagcgccgccgaagacgag
ttcgtcgtcgccgccatcaaaaagaggcagaggatcgacaagtctaaaccgccgtacatc
aacatcgaagacgccatcaacgactcgagtttctcgcccgagaacgacatcatcgtactc
gcgacgagcgccggcgacctcctcccgttcacatacgggctcaacgcgtgcaacgggctc
ggccggatcgaagcgcacaccgacgactgccgggtggtcgaattctcgtccgacggaggt
cgtctcttctcaggcggaaaggacaaaaccgttgtcgtctcggatctggaaaggcgggac
atgatttctttctaccaagacgcccacgacgaacccgtctccgctttgaccgtcttagac
gacaatctcatatgcaccggggatgacggagggaatttgaaaatttgggacctaagggag
cgaaaatcggtcgcttcaaataaaccgagagacatcagcgattatatatcgagcgtggtt
tacaaagaaggctcgaattttgtaagctgcacgagcggcgaaggcaaccttacgatatac
gatctcaagagattgaccatctgttctcagagcgagcatcacaaatccgacctgacgtgc
tcggttttgataaaacgtgaggacgagatcgtgtgcggctcgttgaccggcgagatgatc
atgtacaagtgggccggtacggctgaacccctcggcaagtacgaccccgtaccgaagact
ccggtcaactgcatgttggccgtgtcggagaatcttataatcaccggctgggaagacaag
aagatcagggcgttccacttgtacccgaacgaggaggtcgggatcgtcgggcagcacgac
atgcccgtcgaggggttggagatgtcgagggacggcgatcttatcgcctcgacgtcggcg
gaaaacaagctcaagttttggaacatcggctatctcgaagactacgaggcgaacaagagg
aagaagaagaagaagggaaggcagtctgtcaacttgccgtcctccgccgtcgaggaccga
ggatcctttttctcagaacttttataa

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