Cimex lectularius (bed bug): 106670780
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Entry
106670780 CDS
T05603
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
clec
Cimex lectularius (bed bug)
Pathway
clec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106670780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clec03019
]
106670780
Messenger RNA biogenesis [BR:
clec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
106670780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WDR55
DNA_pol_A_exo1
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_2nd
PMC2NT
Beta-prop_EML_2
HRDC
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
ASA1
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_NOL10_N
DSE1_N
WD40_like
Beta-prop_DCAF4
CPSF_A
WDR90_beta-prop_4th
Beta-prop_ACSF4
Beta-prop_VPS8
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
106670780
NCBI-ProteinID:
XP_014256853
UniProt:
A0A8I6S2B5
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MDDALVQEGDILPGCANFEEFVQAAYPIVMNGVRLSNNLPSTQQYSYFKTYKEFEDIMKA
HGKRLQDTIQMLLVHMDTKRTIHHQPADEKFELIVDTNDKLLDRAHKSMSEMDGTRFNPD
EDFGESSHRQISGSWNRKNLDSVKLADKADDVVKLTVQQRTIRPQALFKDKIDNSNRPWE
PRIKEKPNALKPLSVLLTVNERGQETYTHPYEFELDMWKPSEERLTLVHVVEEPKDLEET
QLIYVQTEKELELMVADLLQQNEFSVDLEHHSYRSFMGFTCLMQISTKDTDFIIDALKLR
HKMHILNTVFTKPNILKIFHGASNDIDWLQRDFSLYVVNMFDTYQAAKVLDFPKLSLAYL
LKHYCKIEASKKFQLYDWRIRPLPNKAKNYAREDTHYLIYIYQMMNNELFAKGNGPRLID
VVYKKSIETCKQVYMKPLLDENSHMNLYRRMGRPFDTRQLFALKEIYKWRDNVAREEDES
PGYVLSNHMMMQMAQTLPREVQGILACCNPIPPLVRQHAVDIHKIILKAKEVPLVKEDSE
VSCESEGETEEEEPDTSDEDWEAGEDESDSSGAESAAEDEFVVAAIKKRQRIDKSKPPYI
NIEDAINDSSFSPENDIIVLATSAGDLLPFTYGLNACNGLGRIEAHTDDCRVVEFSSDGG
RLFSGGKDKTVVVSDLERRDMISFYQDAHDEPVSALTVLDDNLICTGDDGGNLKIWDLRE
RKSVASNKPRDISDYISSVVYKEGSNFVSCTSGEGNLTIYDLKRLTICSQSEHHKSDLTC
SVLIKREDEIVCGSLTGEMIMYKWAGTAEPLGKYDPVPKTPVNCMLAVSENLIITGWEDK
KIRAFHLYPNEEVGIVGQHDMPVEGLEMSRDGDLIASTSAENKLKFWNIGYLEDYEANKR
KKKKKGRQSVNLPSSAVEDRGSFFSELL
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgccctggtacaggagggcgacatcctccccggctgcgccaacttcgaggaa
ttcgttcaggctgcatacccaatcgtcatgaatggtgtacgcctttcgaacaacctgccc
agcacgcagcagtacagctatttcaagacttacaaggagtttgaagacattatgaaggcc
catggcaaacgccttcaggatacgatccaaatgcttttggtgcatatggacacaaagagg
acaatccaccatcagccagctgacgagaagttcgagctgattgtcgacacgaacgacaag
cttcttgatagggcgcacaaatcgatgtcggagatggatgggacgaggttcaacccggac
gaagacttcggcgagagtagccatcgccagatatccggcagttggaacaggaagaacctc
gattcggtcaaattggctgataaggcggacgacgttgtcaagctgacagtgcaacaacgc
acgataaggccacaggcgctgttcaaagacaagatagacaacagtaaccggccttgggag
ccgaggatcaaggagaagcccaacgccctcaagcccctatcggtcctgctcacggtgaac
gaaagaggacaggagacgtacactcacccgtacgagttcgagctcgacatgtggaagcca
agtgaggaacgcctcacgcttgtacatgtggtcgaagagcccaaagacctcgaagagacc
cagctcatttacgtccaaacggaaaaagagctcgagctcatggtcgccgatctactccag
cagaatgaattcagtgtcgatcttgagcatcactcgtaccggagtttcatgggttttacc
tgtttgatgcagatatcgaccaaagatacagacttcatcatcgacgcattgaaattgagg
cataaaatgcacattcttaatactgtttttaccaagccaaacatattaaaaatttttcat
ggtgcaagtaatgacatcgactggctccagagagatttcagcctctatgtcgtgaacatg
ttcgacacataccaggcggcgaaggttctcgatttcccaaagctcagcctcgcgtacctc
ctcaaacactactgcaagattgaagccagcaaaaagttccagctgtacgactggcggata
cgtccactgccgaacaaagcgaagaactatgcccgtgaggacacacactacctcatctat
atataccagatgatgaacaacgagctgttcgccaagggcaatgggcctcgtctcatagat
gttgtttacaagaaaagcattgagacttgcaaacaggtctacatgaagccactcctcgac
gagaacagtcacatgaacctttacaggcgtatggggcgcccttttgacacaaggcagctt
ttcgccctgaaagagatctacaaatggagggacaatgttgcacgcgaggaagacgaaagc
cctgggtacgtcctttcgaaccacatgatgatgcagatggcgcagacgttgccgagggag
gtgcagggtatcttggcatgctgtaacccgataccaccgctcgtgagacagcatgcggtt
gacatacacaagatcatactgaaggcgaaggaggtcccgcttgtcaaggaagactcggaa
gtgagctgcgagagcgagggggagacggaggaagaggagccggacacgtccgacgaagac
tgggaggccggggaggacgagagcgattcgtctggggcggagagcgccgccgaagacgag
ttcgtcgtcgccgccatcaaaaagaggcagaggatcgacaagtctaaaccgccgtacatc
aacatcgaagacgccatcaacgactcgagtttctcgcccgagaacgacatcatcgtactc
gcgacgagcgccggcgacctcctcccgttcacatacgggctcaacgcgtgcaacgggctc
ggccggatcgaagcgcacaccgacgactgccgggtggtcgaattctcgtccgacggaggt
cgtctcttctcaggcggaaaggacaaaaccgttgtcgtctcggatctggaaaggcgggac
atgatttctttctaccaagacgcccacgacgaacccgtctccgctttgaccgtcttagac
gacaatctcatatgcaccggggatgacggagggaatttgaaaatttgggacctaagggag
cgaaaatcggtcgcttcaaataaaccgagagacatcagcgattatatatcgagcgtggtt
tacaaagaaggctcgaattttgtaagctgcacgagcggcgaaggcaaccttacgatatac
gatctcaagagattgaccatctgttctcagagcgagcatcacaaatccgacctgacgtgc
tcggttttgataaaacgtgaggacgagatcgtgtgcggctcgttgaccggcgagatgatc
atgtacaagtgggccggtacggctgaacccctcggcaagtacgaccccgtaccgaagact
ccggtcaactgcatgttggccgtgtcggagaatcttataatcaccggctgggaagacaag
aagatcagggcgttccacttgtacccgaacgaggaggtcgggatcgtcgggcagcacgac
atgcccgtcgaggggttggagatgtcgagggacggcgatcttatcgcctcgacgtcggcg
gaaaacaagctcaagttttggaacatcggctatctcgaagactacgaggcgaacaagagg
aagaagaagaagaagggaaggcagtctgtcaacttgccgtcctccgccgtcgaggaccga
ggatcctttttctcagaacttttataa
DBGET
integrated database retrieval system