KEGG   Cimex lectularius (bed bug): 106672592
Entry
106672592         CDS       T05603                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
clec  Cimex lectularius (bed bug)
Pathway
clec03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:clec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106672592
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clec03019]
    106672592
Messenger RNA biogenesis [BR:clec03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     106672592
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     106672592
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 EXOSC1 RRP40_S1
Other DBs
NCBI-GeneID: 106672592
NCBI-ProteinID: XP_014259620
UniProt: A0A8I6TH84
LinkDB
Position
Unknown
AA seq 300 aa
MTSSNSNTHVNKKPHFRLASERLVLLPAENRKLELFTPGKIVTDDPKLMSGHGTYLENNK
IKSSLAGIEKRVNKLIFIKPLKCRYNGEIGDVVIGRITEVQQSRWKVNINARLDGVLLLS
SVNLPGGELRRRSVEDERMMRQYLSEGDLISAEVQKVYTGDALALHTRNLRYGKLSQGVL
MSVPPGLIMRTKTHFHTICGASLIIGTNGFIWIYPVQTSEEGAGGFARNLDLRVDNESRR
AIIRIQCCIQILADSKIMISDSSIISAVNCSSDYQINELLLPNVKLDIAVAVKHMSYFIN
NT seq 903 nt   +upstreamnt  +downstreamnt
atgacaagctctaattccaacactcatgtcaacaaaaagccgcattttcgactcgcctct
gaaaggctggtcctcttgcctgctgaaaaccgaaaactggaattattcacaccggggaaa
attgttacggacgaccccaaacttatgagtggacatggcacttatttggaaaacaataag
atcaaatcttctttagccggtattgaaaaacgtgtcaacaaattaattttcataaagccg
ttgaagtgtcgatacaatggggaaattggcgatgtcgtcatcggtaggatcacagaggta
cagcagagtaggtggaaagtgaacatcaacgccagattggacggtgtccttctcctttcg
tctgtcaatctccctggaggcgaattgaggagacgttcagtcgaggatgagaggatgatg
aggcaatacctttctgaaggggatcttatcagcgccgaagtgcagaaagtgtacactggt
gatgctttagctttacacactagaaatcttcgatatggaaaactttcacaaggtgtgctc
atgtcagttccacccgggttgattatgagaacaaaaacacattttcacacgatatgcggt
gcaagcttgataatcggtacaaatgggtttatttggatttaccccgttcagacgagtgaa
gaaggagctggaggtttcgcaaggaatcttgatctcagagttgacaatgaatcgaggaga
gcaatcatacgcattcagtgttgcatccaaatactagcagacagtaaaataatgattagc
gactctagtattatttcagcagtaaattgctcttcagattatcagatcaatgaattgctt
ttgccaaatgtaaaactagatattgctgttgcagtgaaacacatgtcttattttattaat
tga

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