Cimex lectularius (bed bug): 106672622
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Entry
106672622 CDS
T05603
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
clec
Cimex lectularius (bed bug)
Pathway
clec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106672622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clec03019
]
106672622
Messenger RNA biogenesis [BR:
clec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106672622
mRNA degradation factors
5'-3' decay
Decapping complex
106672622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
106672622
NCBI-ProteinID:
XP_014259671
UniProt:
A0A8I6SA62
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MSDSFFGFDTTLEGGDAMDDGIPSEEDEEDYDALNDETFGDSVITGDWEQDHEKLAEIAE
LSRRSLIAENGDLSAKIAAFILDDEIQDEKLEPIKPKMRPPPGFCAPTPNHINDEIMLPN
LRVNAMCTVEEIERNLIKPSSVRLEDLERRIILNNQDVLQLRSNQGSPGFIKPPHSHNLN
NQLSKGSLLLPFQVAPPQIPNLSFVLPWNANPWNRLSGPMVRVPHPFDINRIISPSIQQQ
LHKQQQKRRSRSDDEYAGLMTLRERNWLASLQTMQISTNQPFQDDYYFMMYQTTHSGNHN
RKLGSSLKNNREIPLLIKPTYTPLQFENSLGKLQVGSVMAPRKIIDTDIVENIDCASISS
TSKKVKQILLEIEHMFSTVLQAEEAISPLANHNEEMVNPVELFKKTVNTLLKDDKLVAVL
NIRKGKTLVLRILPHIEISAPLVDKFITILPAVAKKDTDQSLLSALPPVRQYLSTCSLQS
LVELSTSLTQDATFLLQNKLGISVIANMIERAEVLIANSANSNDARNWISFMNLLVMNCC
TSELERPVVGIHGPTLAKHLSRCSQLGSISTLQKALSNLSTIEKG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagtttcttcggtttcgataccactctagagggcggagacgccatggacgac
ggaataccgtcggaagaggacgaggaggattacgatgcgctcaacgacgaaactttcgga
gacagtgtcatcactggcgattgggaacaggaccatgaaaagttggcagagattgctgag
ctttcgagacggtcgcttatagcagagaatggagatctcagtgcaaaaattgctgcattc
attttggatgatgagatacaagacgagaaactggaacccattaagccaaaaatgaggcca
ccgccaggcttttgcgccccaacacccaaccatattaatgatgaaattatgctgcctaat
ttgagagtaaatgcaatgtgtacagtagaagaaatagaaaggaatttaataaaacctagt
agtgtgagattagaagatttagaaagacgtataatactgaacaaccaagatgttcttcag
ctgcgatcaaaccaagggagccctggttttattaagccaccgcacagccataacttaaac
aatcaactgtccaaaggatcattgctgctacccttccaggtggcaccccctcaaatccca
aatctctcttttgttttaccttggaatgctaatccttggaatcgtctgtcaggtccgatg
gtcagagttcctcatcctttcgacattaatcgtattatatccccaagcattcaacaacag
ctacataagcagcagcagaagaggagaagtcggtctgatgatgaatatgcaggtcttatg
acgcttagggaaagaaattggctcgcttccctgcagacgatgcaaatcagcacaaaccaa
ccatttcaagatgactattatttcatgatgtatcagactacacattctggaaatcacaat
agaaaattaggctcatcactgaaaaataacagagaaattccattattaataaaaccaact
tatactccactacagtttgaaaattctttaggaaaattacaagtaggaagtgtgatggcg
ccaagaaaaatcattgacaccgacatcgtggagaacattgactgtgcaagcatcagctct
acgtcgaagaaagtcaagcagattcttctggaaattgaacatatgttttcaacagtcctg
caagctgaagaggcaatatcaccgttggcgaaccataatgaagaaatggttaacccagtt
gaattgtttaaaaaaacagtcaacacattgttaaaagacgacaaattggttgctgtactg
aatattagaaaaggaaagacattggtattgagaatattacctcacattgaaatatcagca
cctctcgttgacaagttcatcacgatactccctgcagttgcaaagaaggacaccgatcaa
agtcttctaagtgcattgccaccagtgaggcaatatttatcgacctgtagtctacaatct
cttgtagaattgagcacaagtttgacacaagatgctacgttccttctccagaataaactt
ggaatatcagtcattgcaaacatgatagaaagagctgaagttctcatagcaaatagtgcc
aacagtaacgatgcaaggaactggatatcatttatgaacctgttggtgatgaattgctgc
accagcgaactggagaggcctgttgtaggtattcatggtccaacccttgcaaagcacctt
tctaggtgttcccaattgggtagtatttccaccttgcaaaaagcactctctaacctaagt
accattgaaaaaggttaa
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