Cimex lectularius (bed bug): 106674451
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Entry
106674451 CDS
T05603
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
clec
Cimex lectularius (bed bug)
Pathway
clec03020
RNA polymerase
clec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106674451
09124 Replication and repair
03420 Nucleotide excision repair
106674451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clec03021
]
106674451
03400 DNA repair and recombination proteins [BR:
clec03400
]
106674451
Enzymes [BR:
clec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106674451
Transcription machinery [BR:
clec03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106674451
DNA repair and recombination proteins [BR:
clec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106674451
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
bPH_3
Motif
Other DBs
NCBI-GeneID:
106674451
NCBI-ProteinID:
XP_014262669
UniProt:
A0A8I6SFC3
LinkDB
All DBs
Position
Unknown
AA seq
1868 aa
AA seq
DB search
MAMSDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGIRYPETMEGGRPKLGGLMDPRQGVI
DRLSRCQTCAGNMSECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKLLVSPSHPK
IKEIVMKSKGQPRKRLTFVYDLCKGKNICEGGDEMDIGKENMDESAQSNRKPGHGGCGRY
QPNLRRTGLDVTAEWKHVNEDAQEKKIALSAERVWEILKHITDEECFILGMDPKYARPDW
MIVTVLPVPPLSVRPAVVMYGSARNQDDLTHKLADIIKCNNELQRNEQSGAATHVLAENI
KMLQFHVATLVDNDMPGLPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVI
TPDPNLRIDQVGVPRSIAQNMTFPEIVTPFNVDKMLNLVQRGNTTYPGAKYIVRDNGERI
DLRFHPKPSDLHLQCGYKVERHINDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLS
CTSPYNADFDGDEMNLHVPQSMETRAEVENLHVTPRQIITPQANKPVMGIVQDTLTAVRK
MTKRDVFLEKEQMMNILMHLPVWDGKMPIPAILKPKPLWTGKQVFSLIIPGNVNMIRTHS
THPDDEDNGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICFLELGHEECGL
FYGNIQTVVNNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMDLEP
TPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIAC
VGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGREGL
IDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGEAVEFQKIQ
TVDLSNKKFENQFKFDASNERHLRKIFTEDVLRELLGSGEVISALEQEWEQLCRDREALR
QIFPSGESKVVLPCNLKRMIWNVQKIFHINVRAPTDLSPLKVIEGVRDLLQKCIIVAGDD
HLSKQANENATLLFQCLVRSTLCTKLVSEKFRLSSEAFEWLIGEIENRFKQAQAQPGEMV
GALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAA
ARDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIPEDQEFVNVYYEMPDFDPLRI
SPWLLRIELDRKRMTDKKLTMEQISEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDG
KMNEEEESVDKMEDDMFLRCIEANMLSDMTLQGIEAISKVYMHLPQTDSKKRIIVTESGE
FKAIADWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFSVLGIEAVRKSVEKEMNAVLQ
FYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASHAE
VDPMRGVSENIIMGQLPRMGTGCFDLLLDAEKCKEGIEMPTGVGALAGAGMFYGNATTPM
TSPPSTPWASGSTPMSAYASQPSSWSPTRDYAHFSPSGASDAGGASPWSPGRADGDSSPR
SPMPYLASPGGTSPSYSPQSHSFAPQSPSSPSSQYSPTSPVYAGSSSPSYTPASPSYSPA
SSLYSPTSPSYSPTSPSYSSTSPSYPISPSFTSNSRGYSPSPLYSPPSVYSPPQTNYSPT
SRSMGAATSTNYSLSPASSNYSPNSPSFPSGSTYSPSPSYSVNSYSPHYSPTSPMSYSPT
SPSYGSNSSPQQLQSNQSYSPTSPSYCSTSPANSSYSVSPQVYSPSSPTQFSSTKYSPTS
PYTQSSAQYSPNSSRYSPTSPTTPAYSSNYSPTSPAPYSQTGQSGQYSHSPAVYSPTSPY
DSNEPSPR
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtccgactcgaaagccccgcttcgccaagtgaagcgggtccagtttgggatc
ctgtctccagacgaaattagacggatgtctgtcaccgaagggggcatccgctacccagag
acgatggaaggtgggcgtccgaagctcggaggtctcatggacccccgacaaggagtcatc
gacaggctctctagatgtcagacttgtgcaggtaatatgagtgaatgtcctgggcatttt
ggacacattgatctagccaagcctgtctttcacatcggttttataacaaagacgataaaa
attctccgatgtgtgtgtttttactgttcgaaacttcttgttagtccgagccaccccaaa
ataaaagaaattgttatgaaatccaaagggcagccaagaaaacgattgacattcgtgtac
gatctctgcaaggggaaaaacatatgcgaaggtggtgacgagatggatattggcaaggaa
aacatggatgaaagtgctcaaagtaaccgcaaacctggccatggtggttgtggtcgttac
cagccaaatttaaggcgcacagggctggatgttacagcagaatggaaacacgtaaatgag
gatgcacaagagaaaaaaattgccctcagtgctgagagagtgtgggaaattttgaaacac
atcaccgatgaagagtgtttcattctgggcatggaccccaaatatgctcgccctgattgg
atgatagtgactgtacttcccgtgccaccactttctgtacgtcctgctgtcgttatgtat
ggctcagccaggaatcaggatgacttgacgcacaagctggcggatataatcaaatgtaac
aatgagctacaaagaaatgagcagtcaggagctgccacccatgtcctcgctgaaaacatt
aaaatgcttcagtttcatgttgcgacacttgttgataatgacatgcctggtttaccaagg
gcaatgcaaaaatcaggaaaaccattaaaagccataaaagcacgattaaagggcaaggaa
ggaagaattagaggtaatttgatgggcaagcgagttgacttttctgctcgtactgtaatc
acaccagatccaaatctaaggattgatcaagtcggtgttccgcgttctattgcccaaaat
atgacattccctgaaattgtcacaccattcaatgttgataaaatgttgaatcttgtccag
aggggaaatacgacttacccaggtgccaagtacattgttcgtgacaacggtgagcgaatt
gatcttcgttttcacccgaaaccttctgacttgcatctacaatgcggctataaagttgag
aggcacatcaatgacggtgatctagtcattttcaaccgtcagccaacccttcacaaaatg
agtatgatggggcacagagtcaaagtgcttccctggtcgacatttcgtatgaatttgagt
tgtacctctccatacaatgcagattttgatggggatgaaatgaatctccacgtaccacaa
tcaatggagacgagagccgaagttgaaaatctacacgtcactcctagacaaattataacc
ccacaagctaacaaacctgttatgggtattgtacaagacacactcaccgctgttagaaaa
atgacaaaacgagatgtctttttggagaaagaacaaatgatgaacatcctcatgcactta
cctgtttgggatgggaaaatgcctattcctgctattctcaaacctaaaccgttatggact
ggtaaacaagtattctccctcattataccgggaaatgtaaatatgatacgtacacattca
actcatccagatgatgaagataatggcccttataaatggatttccccaggtgacaccaag
gtaatggtggaacacggagagttagtcatgggcattttatgtaaaaagacgcttgggacc
tcagctggttctttattgcacatttgtttcttagaacttggccatgaggaatgtggcctt
ttttatggaaatatccaaacagtagttaacaactggctactgttagaaggtcactcaatc
ggtatcggtgataccattgctgatcctcagacatatctcgaaatccagaaagctataaaa
aaagccaaagaagatgtaatagaagttattcagaaagcccacaatatggaccttgaacct
acacctggtaacacattgagacagacttttgaaaatcaggtaaacagaatattgaacgat
gctcgtgacaagactggtggttcagctaaaaaatccttaactgaatacaacaacctgaag
gctatggtcgtttctggctctaaaggatcgaatattaatatctcacaggttattgcctgt
gtagggcaacagaacgtagaaggtaagcgtattccgtttggctttaggaagagaaccctg
cctcacttcattaaagacgattatggtcctgagtcgagaggatttgtggaaaactcatat
cttgccgggttaacaccatctgagttctttttccatgctatgggaggaagagaaggtctt
attgatactgctgtaaaaactgcagaaactggttatatccagcgacgtttgataaaggct
atggagtctgtaatggtccattacgatggtactgtgcgtaactctgttggccaacttatt
cagttgcgttatggagaagatggcctttgcggcgaagctgttgagtttcagaaaatccaa
actgttgatttgtctaataaaaaatttgaaaatcagttcaagtttgatgcttcaaatgaa
aggcacttgagaaaaatatttacagaggatgtattgcgagagctgctaggcagtggtgaa
gtaatttcagctttagagcaggaatgggaacaactatgtcgcgatagggaggcgctcaga
cagatttttccgtctggtgaaagcaaggttgtgctcccgtgtaatttgaagcgaatgata
tggaatgtacagaaaatctttcatatcaacgtcagagctcccactgatctatcaccgttg
aaagttattgaaggtgttcgtgatctgcttcaaaaatgtatcattgtggccggagatgat
catcttagcaaacaggcaaatgaaaatgccacacttttatttcagtgtcttgtaaggagc
actttatgtactaaactagtatcagaaaaattcaggctatcatctgaagcttttgaatgg
ttaattggtgaaattgaaaacagatttaaacaagctcaggcccaaccaggagagatggtc
ggagcactggcagcccagagtttgggcgaaccggccactcagatgacactgaacactttc
cactttgccggagtgtcatcgaagaacgtaaccctcggagtacctagattgaaagaaatc
attaacataagtaaaaagccgaaagctccctctctcacggtattcttgaccggtgcagca
gccagggacgctgaaaaagcaaagaatgttctttgccgacttgaacatacaactctgaga
aaagtgactgcaaacacggccatctattacgaccccgaccctcaaaatacagtgattcct
gaagatcaggaattcgttaatgtatattatgagatgcctgattttgaccctttacgaatt
tcaccctggttactccgaatagaattagataggaagagaatgacagacaagaagcttaca
atggagcagatttctgaaaagataaatgctggatttggtgatgatttgaattgcattttc
aatgatgataatgctgagaaacttgtacttcgtatacgtatcatgaacagtgatgatggt
aaaatgaacgaagaagaagaaagtgtcgataaaatggaagatgatatgttccttagatgt
attgaggcaaatatgctttctgatatgactcttcagggaattgaagcaattagcaaagtg
tatatgcacttgccacaaacggattcaaagaagagaataatcgttacagaaagtggagaa
tttaaagcaattgctgattggcttttggaaactgatgggacaagtttgatgaaagtactg
agtgaaagggatgtagatcctgttagaacattctctaacgatatttgtgaaatattttcg
gttttgggcattgaggctgttcgtaaatcagtagagaaggaaatgaatgctgtacttcaa
ttttatggtctttatgtaaattatcgacacttggctttactttgtgatgtaatgacagct
aaaggccatctaatggccatcactcgtcacggaatcaatagacaggacactggtgccctt
atgaggtgttcttttgaagaaactgttgatgtcctcatggatgcagcttcccatgctgaa
gtcgatcctatgagaggtgtttctgaaaatattattatgggacaattacctaggatggga
acaggctgttttgatctcttacttgatgctgaaaaatgtaaggaaggcatagaaatgccg
actggtgttggcgcattagcaggagcaggtatgttctatggaaatgctactactccaatg
acgtctccgccaagcactccttgggcaagtgggtctacacctatgtccgcttatgccagt
caaccaagttcttggtctccaaccagagattatgcacatttctccccatctggagcaagt
gatgctggtggagcttcaccatggagtcctggtagggctgacggtgattcgagtccaaga
tctccaatgccttatttggcttcaccaggaggaacttcaccaagttattcccctcagagc
catagctttgcccctcagtcgccttcttccccttcgtctcaatattctccaacgtcacct
gtttatgcaggttcttcatcgccctcatacactccagcatctccttcttactctccagca
agttctttgtactctcctacatctccttcttattcaccaacatcaccttcttattcctcg
acatctcccagttatcctatctctccatcttttacttcaaattcgagaggttattctcca
tctcctttgtactcccccccatctgtatattcaccaccacaaaccaattattcccctact
tcacgctcaatgggagcggcgacttctaccaattattcgctatctcctgccagttctaac
tattccccaaattcgccctcttttccttcagggtctacatattccccatcgccatcatat
tctgttaattcttattctccacattattctcccacgtctccgatgtcatattcaccaaca
tctccaagctacggcagcaacagcagtccccaacaattacaaagcaatcagagttattct
ccaacctctcctagctattgttccacatctcctgccaattcttcatattctgtatcacct
caagtttattcaccttcatcaccaacacaattttcttctacgaaatattctccaacttca
ccatatacccaatccagtgctcaatactcaccgaattcatcccgctattctcctacttcg
ccaaccaccccagcatacagttcaaattattctcccacttcgccagccccctattctcag
actgggcaaagcggccaatattctcattccccagcagtgtattctcccacatcaccttat
gattcaaacgagccttcaccgcgttag
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integrated database retrieval system
