Clavelina lepadiformis (light-bulb sea squirt): 143444188
Help
Entry
143444188 CDS
T11416
Name
(RefSeq) uncharacterized protein LOC143444188 isoform X1
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRIP
DUF4709
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
143444188
NCBI-ProteinID:
XP_076799447
LinkDB
All DBs
Position
1:25139703..25162218
Genome browser
AA seq
2356 aa
AA seq
DB search
MFRGLKDRIANDTRRGSPSGTPSTPKTAGNGAQKSLEFTPDRTPTTSKPENVKSEAESDG
EASTPVAQQSQGFFKRLEFLTPLKDQVAAKLTESRESINSMVEEIKTPGSTPNKNSNQNH
SSEGEQNEQLNQGSNVHLNESHAATDAGDNPGITVSDIPKEQLLNKILRLEKTLHKYRDK
YSEVMGNFQTTMKDNEKMRAFMQQLQDKHKRRISEMQEAAELDRQAKMHLEEELTSSIEE
KEQRIQVLQTQVKLLKKGEDPPQKQVDTAYTGGIDLQKLQQELDKQAEQIKSLQQDLLEK
EATSEKIKQSHMEEKSKLIGQLKQAKILVEQLEQDKGMALAEAKRLTHEAMEVKDAELMQ
LRQQIQTSQQEMSLLAEKKDSKEKSMFEELEIALANIQKLEEEKKLITEEAEKTKMHLED
QIKQVERTLDDERKSLVADVSRGKAEVLKLMQKQSQERLKIAEDDKEEMLRKMEEKHRLN
IEQIESDHAQKLSSVKEEHESALKEKDEDREAALAELQTKMNAKLEQVAAENESQMRLAI
EERELSKMAAVSKQDDEMQNLLSQREDELRTCRNDLEDQRAKTAEAEERCDMMKTNAEDR
RKELEISHKEMICGLNKEWEEKLSSNVRELKGQISDLEQLRQEDVTKLEAQWEERLKKVE
ACHVQELQTIHSRQEQDMSEKTNLFQQQASKISELESEHGRVTEEAKELEVELKKHRDKV
LQLKNSTKEQIASFEESLNEAKLKHDADEKIIESLESDKKNMAQNHSHQVEQLQQIVEDL
QTKSTKLEEQLEKAKDINVQTVEQLKAEHKIHSENLLQNINYSEENLEKNRKELEEEKSE
LQVKLNETKEQIKQMEENALLTMKEHQSSVEEHERKIKEIETVTYTLQEQLLKERENVQK
MENLMEESKKKYVDDLTEMKSSLSSEFKDKIHRLKQSFEKDSADQKEALTAELQENFLTE
KSQLHIEHELKIKQQLSAQEETLRATFESEKVEIQAKMQSENKETSEREAEIMMQLQNLQ
RAMTSKTEEINILNESLADKDAQIIQLDSKHSSLRQELEKRQEELQSAHLESKTVGDELQ
RTRSELEKHISELNNIRSEFVKKRIELESNVNSLRLKADLLQNSERERENLMESLTKERS
ELEAIRTVVQEKTDEITALKSDLDNRTSEMNKLNEDLSNKSKECEDSKESYQKEIARYKE
AWNKKVTELRTKRETIISNLKKEFEEEKQKMTKEFETSKTELEASLSKEATKEKKGLEND
LTRSLNEKFAEEKVKMKEEWKNKYTDLKSKAEQKIAQLQSKIKEQQAEVDAGKEKMLAQE
EEKKVTTQKMEDEMNNIKLVSEQLQGKSSHVEKLTSQLQSVKQSLEELTAERDEAVNLHQ
NEVASSKALHDELNTLKTSLVEVETKLKSSDETLSHHSSKFEALRKENDDLKLNLHKKID
ECSETEQRVKAKTDELLAMKDKMASMAEEAKSHLETALADSNKESQVKHQATISNLKNEF
EEEKQKMTEEFETSKTELEASLSKEATKEKKGLENDLTRSLNEKFAEEKVKMKEEWKNKY
TDLKLKAEQKIAQLQSKIKEQQAEVDAGKEKMLAQEDEKKVTTQKMEDEMNNIKLVSEQL
QGKSSHVEKLTSQLQSAKQSLKELATQRDEAANLHQNEVASSKVLLDELNTVKTSLAERE
KEVKNCEEALSDRLSKLEVLQKKNEQLKVNLKKKMSGLSDIGKKMKEKEEEIHQRQAQSK
ADAVEIVSLKEQIEKLNTEHGNLKKSLENLEKENSDLNKKRETFHNDNEKSAALSQLLHE
EISKLKEELATTKGEMTFKEKDAENRLENAIADVNKESQTKISELKRKAEQRLTQIKKTF
GSQLEDKLGQISEMSENIKSLEEEREILREEMKRKEESANEKWDEKLREEKLQLEEQVAT
LEAQIKENTENAEKEQKEDRARYDQEKLQLAEVKDHLEAVLEEAHTKLKDAEIRLQEEKD
NFEASLLEERERKMLAVNKLAKEQEMQEKLKVEKENLQNLNEEQSKRIEEMRSRIEALAA
TEETEKDHHTEEMARINQELNSSKKRVEKLEKSRETLKAQMKERNKVHGEEKQALSDEVS
SLKQQLEVLSRSSVEDAAAETEQKLRNLQEDYDRRIKEKEGEQEDKVKQLVKNYETEKMK
LEEDHADEMKQIREKSALADRQTREQHHEEINTMQKEILKYEKELESVVDKYEGELNSRE
SEMSEQVDKATYRALSAEKKLQEAGFDEKINTLQLQVNELSKHLSQSQQAQRTTELRLED
ARRKLSYNSPLADPEKMQYLRQVLYQYMMGSDGKTMAKVLVVLLQYPPGEAQRILEKHKL
PPDWAGDTKNSGTINV
NT seq
7071 nt
NT seq
+upstream
nt +downstream
nt
atgtttagagggctgaaagatcgaattgctaatgacactcgacgtggttcgcccagtgga
accccaagtacccccaaaacagcaggcaatggagctcagaaatcgctagagtttactcca
gatagaacgcctaccacaagcaaacctgaaaatgtcaaaagtgaagcagaatctgacggg
gaagcatcaacaccagttgcacaacaatcgcagggatttttcaaaaggctagaattttta
acaccattgaaagaccaggttgcagcaaaattgacagaaagtcgggaatctattaattcc
atggttgaagaaataaaaacacctggttcaacaccaaacaaaaatagcaaccaaaatcac
tcttcagaaggagaacaaaacgaacagttaaaccagggctcaaatgttcatctcaatgag
tcacatgctgctaccgatgccggtgacaaccctggtatcactgtcagtgatattccgaaa
gagcagcttttaaacaagatcttaagactggaaaaaactttgcacaagtaccgtgataaa
tattctgaagtgatggggaattttcaaaccaccatgaaggataatgaaaaaatgagagcg
tttatgcaacaattacaagacaaacacaagcggcgtattagtgaaatgcaagaggctgca
gaattggacaggcaggctaaaatgcatttagaagaagaactgacttcatcgattgaagaa
aaagaacaaagaatccaagtgctacagactcaggtaaaactgctcaaaaaaggagaggat
ccaccccagaagcaagttgacacagcctacacaggtggcattgacctgcagaagttacag
caggaattagataaacaggcagagcagattaaatcactgcagcaggacttacttgaaaaa
gaggcaacttcagagaaaataaagcaatctcacatggaagaaaaatcgaagctaataggc
cagcttaagcaagcaaaaattcttgttgaacagctggaacaagacaagggtatggcactt
gcagaagcaaaacgcttaacgcatgaagcaatggaagtgaaagatgcagagctcatgcag
cttaggcagcaaattcaaacatcacaacaagaaatgagtttgcttgcggagaaaaaagat
tcaaaagagaaatccatgtttgaggagctagaaattgcgctggcaaacattcagaaactg
gaggaggaaaagaagttgattacggaggaagctgagaagacaaagatgcatttggaagat
caaatcaaacaggtagaaagaactttagacgatgaaagaaaaagtcttgtagccgatgtg
tctcgtgggaaggccgaagtcctgaaacttatgcagaaacaatcccaggaacggctaaaa
attgccgaagacgacaaggaagaaatgcttcgcaagatggaagaaaaacatcggcttaac
atcgaacaaattgaaagtgaccatgcacaaaaactctcctccgttaaggaagagcatgag
agtgcattgaaagagaaagatgaggatcgggaagcggctcttgctgaacttcagacaaag
atgaatgctaagcttgaacaggttgctgctgaaaacgaatctcagatgagattggcgatt
gaggagcgagaactaagcaagatggctgccgtttcgaagcaagatgacgagatgcagaat
cttttgtctcagcgtgaagatgaactgagaacctgtagaaatgatctagaagatcagaga
gccaaaacagctgaggctgaagaaagatgcgacatgatgaagacgaatgctgaagatcga
cgaaaggagcttgaaatttctcacaaggagatgatctgtggcctgaataaagaatgggaa
gaaaagttgtcttcaaatgtccgtgaactaaaaggccaaatcagcgaccttgaacaactg
agacaagaggatgttacgaagcttgaagcacagtgggaagagagacttaagaaagtagag
gcttgtcatgtccaggaactgcagacaattcacagccggcaggaacaggatatgagtgag
aagacaaacctctttcaacaacaagcctcaaaaatcagtgaacttgaatcggaacatggc
agggtaacagaagaagcaaaagaactggaagttgaattgaagaaacatcgcgacaaagtc
ctccagttgaaaaacagcaccaaggaacagatcgcttcatttgaggagagcttaaatgaa
gcgaaactcaaacatgatgctgatgaaaagataattgagagcttagagtctgacaagaaa
aatatggcacaaaatcatagccatcaagtggaacaattacagcaaatcgtggaagacttg
cagaccaaatctaccaaattggaagaacaacttgaaaaggccaaggacatcaatgtacaa
actgtggaacaactgaaagctgaacataaaatccactcagaaaatctgcttcaaaatatt
aattattcggaagagaatttagaaaagaatagaaaagagctggaagaagaaaaatcagaa
cttcaggtcaaactaaatgaaacgaaagagcaaatcaaacagatggaagagaatgcttta
ttaaccatgaaagaacatcaatcaagtgttgaggagcatgaaagaaaaataaaggaaatc
gagacagtaacttacaccttgcaggagcagctcttgaaagaacgagaaaatgttcaaaaa
atggaaaaccttatggaagagagtaagaagaagtacgttgatgacctgacagaaatgaaa
tcatccttgtcttcagaattcaaggacaaaatacacagactaaagcaaagttttgaaaaa
gactcggctgatcaaaaggaagctctaactgccgagttgcaagagaatttcctgactgaa
aagtctcaacttcacatcgaacacgagttgaaaataaagcaacaacttagtgctcaagaa
gaaactctcagagctacgtttgagagtgagaaagttgaaatccaggcaaaaatgcaatca
gaaaacaaagaaacatcggaacgtgaagcagaaatcatgatgcaattacaaaatttgcag
agagccatgacgtcaaaaaccgaagaaataaacattctcaacgagtcattggctgataaa
gacgcgcagatcattcagctggacagcaagcacagctctcttagacaggagctcgaaaaa
cgtcaagaagaacttcaatctgctcatcttgaatcgaaaacagtcggagatgaacttcaa
cgtactcgttctgagctggagaaacacatcagtgagctgaataacattcgatccgaattt
gtcaagaagagaattgaactagagtcaaatgtaaacagtctgcgtttgaaagcagattta
ttgcagaattctgagagggaaagggagaaccttatggagagcctgacgaaggaaagatca
gagttagaagccatcaggactgttgtgcaagaaaaaactgatgaaataactgctctgaaa
tctgatttagacaacaggacatctgagatgaacaaactcaatgaagatctctcaaataaa
tcaaaagaatgcgaagacagtaaagaatcttaccaaaaggagatagcgaggtataaggag
gcgtggaacaagaaagtcacagagcttcgtaccaagcgtgaaacaattatttcgaacctg
aagaaagaatttgaagaagaaaagcagaaaatgacaaaagagtttgaaacgtcaaaaact
gaactggaggccagtttgtcaaaagaagctacaaaagagaaaaaaggacttgaaaatgat
ttaacgagaagtttgaatgaaaaatttgctgaagaaaaagtgaaaatgaaagaggaatgg
aaaaataaatatacagacttgaaatcaaaggctgaacagaaaatagcccaacttcaatca
aagattaaagaacaacaagcagaagttgatgcgggaaaagagaagatgttggcacaagaa
gaggaaaagaaggtcaccacacagaaaatggaagacgaaatgaacaacataaaattggtt
tctgagcaacttcaaggcaagtcgagtcatgttgaaaagctgacgagtcagttgcagtct
gtcaagcagtcattggaagagctcacagctgagcgagatgaagcagttaatcttcatcaa
aatgaagtcgcatcaagtaaagcactccacgatgagctgaatactttaaaaacatctctc
gtggaagtagagaccaagttgaaaagttccgacgaaacattatcccaccattcttcaaaa
tttgaagctcttcgcaaagagaatgatgacctaaaactcaacctacataaaaagattgat
gaatgttctgaaactgaacagagagtaaaagcaaaaacagatgaattgctggcaatgaaa
gacaaaatggcatccatggccgaagaagccaaaagtcatttggaaactgcgctcgctgat
agtaacaaagaaagtcaagtcaagcaccaagcaactatttcgaacctgaagaacgaattt
gaagaggaaaagcagaaaatgacagaagagtttgaaacgtcaaaaactgaactggaggcc
agtttgtcaaaggaagcaacaaaagagaaaaagggacttgaaaatgatttaacgagaagt
ttgaatgaaaaatttgctgaagaaaaagtgaaaatgaaagaagaatggaaaaacaaatat
acagacttgaaattaaaggctgagcagaaaatagcccaacttcaatcgaagattaaagaa
caacaagcagaagttgatgcgggaaaagagaagatgttggcacaagaagatgaaaagaag
gtcaccacacagaaaatggaagacgaaatgaacaacataaaattggtttctgagcaactt
caaggcaagtcgagtcatgttgaaaagctgacgagtcagctgcaatctgctaagcagtca
ctgaaagaactcgctactcaacgagatgaagccgctaatcttcatcaaaatgaagtcgca
tcgagtaaagtgctcctagatgagttgaacactgtaaagacatctttagctgagagggaa
aaagaagtaaaaaattgcgaggaagctctctcagaccgattgtctaaattagaagttttg
caaaagaaaaatgagcagctaaaagtgaatttaaaaaaaaagatgtccggtttgtctgac
attggaaagaagatgaaagaaaaagaagaagaaatacatcaacgacaagctcaatcaaaa
gctgatgctgtggaaatcgtgagcttgaaggagcaaattgaaaaactaaacacagaacat
ggaaatctcaaaaaatccttagaaaatttagaaaaagaaaactctgaccttaataaaaaa
cgggaaacttttcataacgacaatgaaaagtctgccgctttgtcacaattactacatgaa
gaaatcagcaaattgaaggaggagttggcaacaacaaagggcgaaatgacattcaaggaa
aaagatgctgaaaatcgtttagaaaacgcaattgccgatgtcaacaaagaaagccaaaca
aagataagcgagttgaaaagaaaagccgaacagagactgactcaaatcaaaaagacattt
ggatcccagttggaagacaaacttggtcaaatatccgagatgtctgaaaatattaagtcc
ctggaggaggaaagggagatccttagggaggagatgaaaagaaaagaagagtctgcaaat
gaaaaatgggatgagaaattgagggaggaaaaactgcagttagaagagcaggtggccacg
ttagaggcgcaaattaaagaaaacacagaaaatgctgaaaaagagcaaaaggaagataga
gctcgatatgatcaggaaaaacttcaactcgctgaggtcaaagatcaccttgaggctgtt
ttagaagaggcacacacaaagctgaaagacgcagaaattcgcctccaagaagagaaagat
aactttgaagcctccttgttggaggagcgtgagaggaagatgttggctgtgaacaaactt
gccaaagagcaagagatgcaggaaaagctaaaagtagaaaaagaaaatctgcaaaacttg
aatgaagaacaaagcaagcgaattgaagagatgcgaagtaggattgaagccttggcggcg
acagaagaaaccgaaaaagaccaccacacagaggagatggcaagaataaaccaggagttg
aattcttccaagaagcgtgtggagaagttagaaaagagcagggaaacgctcaaagcacag
atgaaggaaagaaacaaagtccatggtgaagaaaaacaggctctttccgacgaggtatca
tctttaaagcaacaacttgaggttttatctcgctcatcagtggaggatgcggctgcagaa
acggagcaaaaattgcgcaatcttcaggaggactatgatcgcaggatcaaggaaaaagag
ggagagcaggaggacaaagtgaagcagcttgtcaagaattatgagacggagaaaatgaaa
ctcgaagaggatcatgcggatgaaatgaagcagattcgtgaaaagtctgctctggcagat
cgacaaactcgtgaacaacatcacgaagagatcaacactatgcagaaggaaatcttgaag
tatgaaaaagaactggaaagtgtcgtagacaagtatgaaggcgagcttaacagcagagaa
tcggagatgtcggaacaggtggacaaggcgacatatcgtgctttatccgccgaaaagaaa
ctacaggaagccggatttgatgagaagataaacacactgcagcttcaagtgaatgagcta
tcgaagcacttgtctcaatcccagcaagcgcaacgaacaacagagttgaggttagaagat
gcgcggagaaaattgtcctacaactcgccactcgccgaccccgagaagatgcagtatctg
cgacaagtcctttatcagtacatgatgggctcggatggcaagaccatggcaaaggttctg
gttgttctattgcaataccctcctggcgaagctcaaaggatactggagaaacacaaacta
ccaccggattgggctggagacaccaagaactctggaaccattaatgtgtag
DBGET
integrated database retrieval system