Clavelina lepadiformis (light-bulb sea squirt): 143444346
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Entry
143444346 CDS
T11416
Name
(RefSeq) uncharacterized protein LOC143444346 isoform X1
KO
K08535
liver X receptor beta
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
143444346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clep03000
]
143444346
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
clep03310
]
143444346
Transcription factors [BR:
clep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
143444346
Nuclear receptors [BR:
clep03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
143444346
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NCBI-GeneID:
143444346
NCBI-ProteinID:
XP_076799659
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Position
1:complement(19582995..19601759)
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AA seq
853 aa
AA seq
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MDNVKNKEIVVTNGKDLNNNLLNQTEISNLPMAVKWPDDNQQPSQKIVTPNVSTAGANGT
VGLLPMPLAMPLTGLTTLPIALCAFNGSGNNNPAQPSGNFLSQGSQQSGGLILLNVPGNN
NTNLSALSQLVATRIPPSTPPIIFGANTGNAPSSSLMNQQPYQGQTAQGPAAVDVNFSQA
CTLSSQISNIVPQPPVITQGGPAAYMLVPIHQLPTPNSLSIVQSSATTPASPQLQNISSL
SSAPPSHPMSSTSLATSHVVAVNGQVMSVSGAGGQINATHSIGASPNLSAFSQPCLTQPT
YSNFCTMQAPGHDSHMQNSQVSDIPDNIITNFTPPTISFSTPPIHDPHISSSVPPESVDM
SAFLSQEGGKEKVPSLDQMNCLDSANVAKQPHPALQTINMSSTPQTMSYAPSPHNESRLS
SPGNIVSIASSPSQMLYGAQHNASPLNSSSGVQGQHVNLTASPSTPTQLKEVVESSHSAS
VDGSRNKKEKRKKGPAPKLDGHEVCLICGDRASGYHYGVLSCEGCKGFFRRSIIKNPSYK
CKGDGSCHMDTYMRRKCQFCRLKKCRAAGMKDESVLSEVDGGTRAKRIKKEGSGFVASSM
HFAPNLSFNGEPIPSLTSHQRNLVEMLQENETRFQWPTQEDVAKVTPWIESGDTHRCKAE
RFAHFTELSILIVQLVVEFTKQLPGFLTVSREDQIVLLKACTIEVMLLRAAKQYDKKSKT
INFLNGKFYDKSSFYRAGMQVEFVDPIFEFCNSMAKLGLDEAEYALLAAINTFSPDRPNI
KDLKTIETVQDSYVELLQVYLKIHHPGDPLMFPRTLMKLVELRTLNSCHSEQIFALKLQD
KKLPPLLAEIWDM
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggataatgtgaaaaataaggaaattgttgtgacaaatggaaaagacctaaacaacaac
ctgttaaatcagacagaaatttcaaatttgccaatggcggtgaaatggccagatgataat
cagcagccatctcagaagatagtcaccccaaatgtcagcactgctggagcaaatggtaca
gtgggtttgcttccaatgccattagcgatgccattgactggcttgacaactttgccaatt
gctttatgtgcatttaatggatcaggtaataacaatccagctcagcctagtggaaatttt
ttatcacaaggtagtcagcaaagtggtggactaatattattaaatgtccctggaaataac
aacactaacctgagtgcactatctcagttggttgctactcgaattccaccctctactccc
ccaattatatttggtgcaaataccggtaatgcaccatcttcatcactaatgaaccaacag
ccatatcagggacagacagcacaagggcctgccgcggttgatgtaaatttttctcaggca
tgtactcttagcagtcaaatttcaaacattgttccgcaacctcctgtcattacacaaggt
ggacctgcagcttacatgcttgtacctattcatcagcttcctacgccaaattcattgtcc
atagtgcaatcgtctgctaccacaccagcaagccctcaacttcaaaacatatcttcactg
agcagtgctcccccatcacatcctatgtcatctaccagcttagctactagtcatgttgtt
gcagtgaatggacaagtgatgtcggtttcaggggccggtggtcaaataaacgctacacat
tctatcggtgcttccccaaatttatctgcatttagtcaaccttgcttaacccagccaaca
tattcaaatttttgtaccatgcaagctcccgggcacgacagccacatgcagaattctcaa
gtatctgacattccagataatataattactaacttcacacctccaacaataagcttttcc
actccccctatccatgaccctcacatttcgtccagtgtaccaccagagtctgttgatatg
tcagctttcctaagtcaagaaggtggtaaagaaaaggttccatcgctggatcagatgaat
tgcttggattctgccaatgttgctaagcaacctcatcctgcactgcagacaattaatatg
tcatcaactcctcaaacaatgagttatgctccttctccacacaatgaaagtaggttgtca
agccctggtaacattgtttctattgcttcctcaccatcgcaaatgttatatggtgctcaa
cacaatgcatctccgcttaattcttcatcaggtgttcaaggtcaacatgtaaacttaact
gcttccccgtccactccaacccagctaaaagaggttgtggaaagctcacatagtgcttca
gtagatggctcaaggaataaaaaagaaaaaagaaagaaaggtccagctccaaaactagac
ggacatgaagtttgtttgatatgtggtgatagagcatcaggttaccactacggggtgctt
agttgtgaaggctgtaaaggtttcttcagaagaagtattattaagaatccttcatacaaa
tgcaaaggagatgggagctgtcacatggacacgtatatgagacgaaaatgtcaattttgc
agattaaaaaagtgtagagctgcgggaatgaaagatgaaagtgttctatcggaggtggat
ggtggaaccagagcaaagcgtattaaaaaagaaggtagcggatttgttgcttcatcaatg
cattttgctccgaacttatcgttcaatggagaaccgataccaagtctcacatctcatcaa
agaaacttggtcgaaatgcttcaagaaaatgaaacaagatttcagtggcccactcaggaa
gatgtagcaaaagttacaccttggattgagagtggggatactcaccgttgcaaagcagaa
agatttgctcactttacagaactttccattctcattgtgcaactggttgtcgaatttacc
aaacaactgccaggcttcctaacagtttctagagaggaccaaattgtgctgttaaaggcc
tgcactatagaggtgatgttactgcgagcagcaaagcagtatgacaagaaatctaaaact
ataaacttcttaaatggaaaattttatgacaaatctagtttttatcgagcaggcatgcag
gttgaatttgtggatcctatttttgaattttgcaatagcatggccaaattaggtttagat
gaagcagagtatgcattgttagcagcaataaacaccttttccccagatcgaccaaatata
aaggatttaaaaacaattgaaactgtacaagattcatatgttgaacttttgcaagtgtat
ctgaagatccatcatccaggggatccactcatgtttccacgaactttaatgaagctggtt
gaactacgaacactaaacagctgtcacagtgaacagatatttgcccttaagttgcaagat
aaaaagttgccaccattgttggccgaaatttgggatatgtag
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