Clavelina lepadiformis (light-bulb sea squirt): 143445190
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Entry
143445190 CDS
T11416
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04120
Ubiquitin mediated proteolysis
clep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
143445190
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
143445190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143445190
04121 Ubiquitin system [BR:
clep04121
]
143445190
03029 Mitochondrial biogenesis [BR:
clep03029
]
143445190
Enzymes [BR:
clep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
143445190
Membrane trafficking [BR:
clep04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
143445190
Ubiquitin system [BR:
clep04121
]
Ubiquitin ligases (E3)
HECT type E3
143445190
Mitochondrial biogenesis [BR:
clep03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
143445190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
143445190
NCBI-ProteinID:
XP_076800225
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All DBs
Position
2:19305885..19321088
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AA seq
886 aa
AA seq
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MAGSDNQSNIYGHQTQDGNVSYRLVRIQVLSGHSLAKKDIFGASDPYVTVSLYKPKRSGA
GHISKIYASVNTKTKKKTLNPVWNEQFTFRVIPRENRILFEVFDENRLTRDDFLGQVDIP
INSTYITNEDPNTPPIHREFPLRPRSSKSRVKGHLRLKLSYIDVPASSDNQDDSPTEGDW
EVVDDESSLPEGWGERQDHLGRMYYVHHSTRTVQWNRPTRASVPVSSSSTSFSSTSSSSP
PQQPRTANGSSPSSSSRNGTPITEVAARQFRQRRHISEDASELPSTSQTNNNEDQLWEVI
EETSISDDSTDSQSVNSSEAAPPTNEEPAQLTNAPTNATSQSQVVEADGDQPLPEGWSVR
VDPKSQRKYYVDHIKKKTQWNRPTLASTAQKSNNTRSTSSTPTNSSNYLPKGWEMKTAPG
GRVFFIDHNRQITTWTDPRSKRPPQKRGNIKSANELGPLPAGWEERIHTDGRIFFVDHIN
HKTQWEDPRLLNPEITGPAVPYSRDYKQKYEFFKSKLGKTVPRDIPNRFEMKVDRKTILN
DSYRAITRVKKADLLKARLWIEFNKEKGLDYGGVAREWFYLLSKEMFNPYYGLFEYSATD
NYTLQINPNSGLCNDDHFEWFRFIGRVAGMAVFHGKLLDAFFIRPFYKMMLGKPITLRDM
ESVDSEYYNSLKWILENDPTGLDLYFTVDEELFGQMKVNELKPGGSDIQVTDENKREYIQ
LVIKWRFVSRVQEQMKAFLQGFNELIPSNLVKIFDENELELLMCGLGDVDVNDWRKNTNY
KGEYSANHIVIQWFWKTILLMDPELRVRFLQFVTGTSRVPMNGFAELWGSNGPQLFTIEK
WGTAEKLPRAHTCFNRLDLPPYHSFEELRKKLHLAIESTQGFEGVD
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggctggttcagataatcagtcaaatatctatggacatcagacacaagacggaaatgta
tcttatcgcctggtgcgaatacaagtgttgtctggacatagtctggccaaaaaagatatt
tttggtgccagtgacccctatgtgacagtatcattgtataaacccaagcgctcaggagca
ggacatatatcgaaaatatatgcttctgtaaacacaaaaacaaaaaagaagactttaaat
cctgtctggaatgaacaattcacttttcgagtcattcctcgtgaaaatcggattttattt
gaagtttttgatgaaaatcgcttgactcgggacgattttctgggacaagtggatattcct
attaatagcacatatattacaaatgaagatcctaacacacctcccattcaccgtgaattt
cctcttcggcccagaagttcaaagtcaagagtgaaaggacatttgcgtctgaaactttca
tacatcgacgtcccagcatctagtgacaatcaggacgactctcctactgagggtgactgg
gaggtagtcgatgatgaatcttcgctcccagaaggatggggggagaggcaagatcatctt
ggaagaatgtattatgtacatcacagcaccagaactgtgcaatggaatcgaccaactaga
gcatcagtgcccgtctcttcatcgagcacgtcattctccagtacaagctcctcatcacct
ccgcaacagccacggacagcaaatggatcctctccttcatcatcttcgaggaacggcact
cctataactgaagtggcagcaagacagtttcgacaacgaaggcatattagtgaagacgcc
agtgagctgccttccacttcgcagacaaataataatgaagatcaattgtgggaggtgatt
gaagaaacctctataagtgacgactctactgactctcagagcgtaaattcatcagaagct
gcacctccgaccaatgaagaaccagcccaactcacaaatgctccaacaaatgcaacttcg
cagtctcaagtcgtggaggcagacggcgatcagcccctaccagaaggctggtcagtacga
gtggatccgaagagccagagaaagtactacgttgatcatatcaaaaagaagacgcagtgg
aaccgaccaactctcgcctcgacagcacagaagtcaaataacacaagatcaacctcttcg
acaccaaccaattcatccaactatcttcctaagggatgggaaatgaagactgcccctggg
ggtcgagtgtttttcattgaccataatcgacagataaccacatggaccgatccgcgatct
aagagacctccacagaaacggggaaatattaaaagtgccaatgaactcggaccattaccg
gctggctgggaggaaagaattcacacagacgggaggattttctttgttgatcacattaac
cataaaacccaatgggaagatccaagattgttaaatccagaaataactggaccggctgtg
ccttattctcgggactataagcaaaagtatgagttcttcaagagcaaattgggcaagact
gtacctcgcgacattccgaatcggtttgagatgaaggttgatcgaaaaactattctaaat
gattcctatcgagccataacaagagttaagaaggcagatcttctaaaggcccggctttgg
attgaattcaacaaggaaaagggccttgactatggaggtgtagccagagaatggttctac
cttctgtcgaaggaaatgttcaatccatattatggtttatttgaatattcggccactgac
aactacacccttcagatcaatcccaattcaggcctgtgcaatgacgaccatttcgaatgg
ttccggtttattggaagagttgcggggatggcggtttttcacggcaagctactcgatgca
ttcttcatacgtcccttctacaagatgatgttgggcaaacctattactttgcgggacatg
gaatctgtggacagtgaatattacaattctctgaagtggattctggaaaatgacccgaca
ggcctggacctctatttcacagtcgacgaggaactgtttggtcagatgaaggttaacgaa
ctgaagccaggaggttctgatatccaagtgacagatgaaaacaaacgcgagtatattcag
ctcgttataaaatggcggtttgtctccagggtgcaggaacagatgaaagcgtttttgcag
ggatttaacgagttgattccgagcaatttggtgaaaatatttgatgaaaacgaacttgag
ttactaatgtgtgggcttggtgacgtggacgttaatgattggagaaagaacaccaattac
aagggagaatactcggccaatcacattgtgatccagtggttttggaaaacaattttactc
atggacccggaattacgtgttcgattcctgcaatttgtcacgggtacatcgagggtaccg
atgaacggtttcgctgaattatggggtagtaacggaccccagttatttacaattgaaaaa
tggggcactgctgaaaaacttccccgggcccatacctgtttcaatagacttgacctaccc
ccctaccactcgttcgaagagctacgcaaaaagctccatctcgcaatagaaagtactcaa
ggctttgagggagtcgattga
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