Clavelina lepadiformis (light-bulb sea squirt): 143445252
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Entry
143445252 CDS
T11416
Name
(RefSeq) coronin-1B-like isoform X1
KO
K13882
coronin-1A
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
143445252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143445252
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clep04812
]
143445252
04147 Exosome [BR:
clep04147
]
143445252
Membrane trafficking [BR:
clep04131
]
Endocytosis
Phagocytosis
Coronins
143445252
Cytoskeleton proteins [BR:
clep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
143445252
Exosome [BR:
clep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
143445252
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
DUF1899
WD40_4
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
DSE1_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
TRM82_WD
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EIPR1
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
Beta-prop_DCAF12
Beta-prop_WDR36-Utp21_1st
ASA1
EIF3I
Trimer_CC
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_EML
TMP_N
Beta-prop_SCAP
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
143445252
NCBI-ProteinID:
XP_076800316
LinkDB
All DBs
Position
2
Genome browser
AA seq
479 aa
AA seq
DB search
MSFVRSSKYRHVFGTASKNTYNGIKVTRSSAESTFCAVNPKFVAIVVQGAGGGPFLVLPL
DKTGRIPTDQPFVNGHTQQVIELAWSPFNDNLLASTSEDGTILVWEIPDEGVKQTLTDPW
QKLGGADGHHKRVSLIQWHPVADHILASGGYDNRVLVWNVLTAEVVFEVTYGDIPTCMAW
NFNGSLLATTCKDKALRIHDVRADTLKAEKKMLFSGAKAAKCTFVKGDKLFCVGFGRMSK
RMYALYDLNNLDQPLVEEEVDQASGTVYPYYDQDTGVVFTVGKGDSQIRYYEIDDAEPYV
HFLSSYGSSNSQRGFGYMPKRGLEFKCCEIARFYKLTEDKCEPVAMTVPRKSELFQPDIY
PPCLSDEPALTAEEWIAGKNANPNTVDARLLFDQQKGSAPAKKAVKSVAKALPTKKSSAT
GGASAALSLPAVTVGVDLDELCDDVKKLKATVRKLNRRVLTLEKQLGDVVAVDMNDEEE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtcagatcaagcaagtatcgccatgtatttgggactgcgagtaaaaacacc
tacaacggcatcaaagtcacgaggagcagcgccgagagcacgttttgtgccgtaaacccg
aagttcgtggcgattgtggtgcaaggagcaggaggaggaccattcctagttcttcccctt
gataaaactggcaggataccaacggaccaaccttttgtcaacggtcatacacagcaagtt
attgagttggcttggtccccttttaatgacaatttgttggccagtacttcagaggatggt
acgatcttggtgtgggaaatacccgatgaaggtgtgaagcagactttaactgacccctgg
caaaaattgggcggtgctgacggccaccataagagggtttcgctgatacaatggcatcca
gtagccgatcatattttagcaagtggaggttacgacaatagagttcttgtatggaatgtc
ttaactgctgaagtagtatttgaagtcacttacggggacatcccgacctgcatggcatgg
aatttcaacgggtcgcttcttgccaccacctgcaaggacaaagcattgagaattcatgac
gttcgggcagacacattgaaagcagagaaaaagatgttattcagtggagcaaaggctgca
aaatgtaccttcgtaaaaggtgacaaactgttttgtgtgggatttggtagaatgtcgaag
agaatgtatgcactgtatgacttgaacaacttagaccagccactggttgaagaagaggta
gatcaagctagtggcaccgtatacccctactatgaccaggacaccggtgttgtgttcact
gttggaaagggggactcacagattagatactatgaaatagatgatgcagaaccgtatgtc
cattttctttcatcttacggatcttccaacagtcaaagaggttttggatacatgccaaaa
cgaggactggagtttaagtgttgcgagatagcaagattttacaaactgacagaagataaa
tgtgaacccgtcgccatgacagtgccacgtaagtccgaactctttcaacctgacatctac
cctccatgtctcagcgatgaaccagcacttacagctgaagaatggatcgcagggaaaaat
gccaacccgaatacagtggatgcaaggctgttgtttgaccaacaaaaaggaagtgcacca
gcaaagaaggcagtaaaatcggtcgccaaagctctgccaacgaaaaaatctagtgcgact
ggtggagcatccgccgcgttgagcttacctgcggtaaccgtcggtgtggatttggatgag
ctttgcgatgacgtgaagaaactcaaggcgaccgtacggaaactgaatcgacgcgtgttg
accctggaaaagcagcttggagatgtggttgcagtggatatgaatgatgaggaggaatag
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