Clavelina lepadiformis (light-bulb sea squirt): 143445525
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Entry
143445525 CDS
T11416
Name
(RefSeq) uncharacterized protein LOC143445525 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143445525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143445525
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
143445525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
143445525
NCBI-ProteinID:
XP_076800797
LinkDB
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Position
2
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AA seq
425 aa
AA seq
DB search
MTSDITLASDVGDGTLDTGKMFIGGLSWHTTTDGLKEYFSKFGEVSDAMVMRDPTTKRSR
RVLYTPYDRGFGFVTYNDSKDVEKVLTNNQHTLDQKSIDPKLAIPRKVQAKMVTRTKKIF
VGGLSANTVVEDLKNYFSSYGKVEDAMLMFDKQTNRHRGFGFVTFDSEDPVEKVCEIHFH
EINNKMVECKKAQPKEVMLPTSARSARARTYPYDPTAYIIAAGVPGLATFGRPAPAAYAT
AAYASYPSALSFVDPQATPAGATALYHPGIAYAPTPPPGTASLAYTQDAATAAAMAVARV
GMTAVTPGTRLETLNSATQATLPQLPVASATDLKRDFVASVLNSYAHGGTVPGIPGYHPS
PSPSARALAGATNTGELITTDAAFTQHYVGQNASPQPAVATAIPGGLTAGHFASQGHLIA
GLTYP
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgatataactttggcttcggatgtgggagatggaacactcgatactggaaaa
atgtttattggtgggctaagctggcataccaccacagatggtttaaaagagtacttcagt
aagtttggagaggtgtccgacgctatggttatgcgagatcctaccactaaacgttccagg
cgtgtgctttatactccttatgacaggggattcggattcgtgacctacaacgacagcaag
gatgtggaaaaagttctaacaaacaatcaacatacacttgaccaaaaatcgattgatcct
aaacttgcgattccaagaaaagttcaagcaaagatggtaaccagaactaaaaagattttt
gtcggtggattgtccgcaaacacagtggtcgaagatcttaagaactacttcagttcgtac
ggaaaggttgaggatgcaatgctcatgttcgacaagcaaacaaaccgacacagagggttt
ggctttgttacttttgacagcgaagatcctgtagaaaaagtttgcgagatacattttcat
gaaataaacaataaaatggttgaatgcaagaaagcacaaccgaaagaagtaatgcttcca
acttcagcacgaagtgcaagagcaagaacttacccctacgatccaacagcatacatcata
gctgctggtgttcccgggcttgcaacgttcggccgtccagctccagcagcatacgccact
gctgcatatgcgtcgtatcccagtgccttaagctttgttgatccgcaagcaaccccggct
ggagcgacagcgctatatcaccccggcattgcctacgcaccaaccccgccacccggaacg
gcttcccttgcgtatacgcaagatgctgctacggcagcagccatggctgttgcccgagtt
gggatgactgcggtcacccctggaaccagattggaaactctcaattcagccacacaagcg
acgttgcctcagcttcctgttgcttccgccaccgacctgaaaagggatttcgtcgcttca
gttcttaatagctatgctcacggaggcacagttcctggaatacccggttaccacccatcg
ccgtctccaagcgctagggcattagctggagccactaatactggggagcttataactaca
gatgcagcatttacccaacattatgttggacaaaacgcttccccacaaccagcagtagca
acagctatacctggcggtcttacagctggtcatttcgcctcgcaaggtcatctaattgct
ggtctcacgtatccttaa
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