Clavelina lepadiformis (light-bulb sea squirt): 143445558
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Entry
143445558 CDS
T11416
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial-like
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00280
Valine, leucine and isoleucine degradation
clep00650
Butanoate metabolism
clep01100
Metabolic pathways
clep04146
Peroxisome
Module
clep_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
143445558
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
143445558
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
143445558
Enzymes [BR:
clep01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
143445558
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
143445558
NCBI-ProteinID:
XP_076800855
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Position
2:16074379..16076170
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AA seq
319 aa
AA seq
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MSIVINKPWVCTTTWKASVRLFSNYVRIVEVGPRDGLQNEKTLVSTETKVELINRLAACN
VPVIEATSFVSPKWVPQMKDHTEVMKGIARHSKAKYTALTPNLQGFEKAVEAGVDEVAIF
GAASEAFSKKNINCSIKESIERFKPVAEAAETLSIPVRGYVSCVLGCPYEGVISPSKVAY
VTEEFFEMGCYEVSLGDTIGVGTAGSTKEMLQVLLRSFDVGKLALHCHDTYGQALANILT
GLDLGIRTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGLESGVDIDKLVEVGEFIS
KVLNRDNGSKVGRAVSVKF
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtccatagtgatcaataaaccatgggtctgcaccaccacttggaaagcatcagttcga
ttattttcaaattatgttagaattgttgaagttgggcccagagatggtcttcaaaatgaa
aaaactttggtttctactgagacaaaggtggaattaattaatcgtttggcagcatgcaat
gttccagttattgaggctacaagctttgtctcccctaaatgggtaccgcagatgaaagat
cacacggaagttatgaaagggatcgctcgacacagcaaagccaagtatacagcactgact
ccaaatctgcaaggttttgaaaaagcagtagaagcaggtgtggatgaagttgccatattt
ggtgcagcgtctgaagcattcagtaaaaagaatataaactgttctattaaagaaagtatc
gagagatttaagccagttgctgaggccgctgaaacactatctattcctgtgcgtggctac
gtttcatgtgtccttggttgcccatatgaaggggttatatcacctagcaaagtagcgtat
gtaacagaagaattttttgagatgggatgctatgaagtctcacttggagatacaatcggt
gttggcactgcaggatcaacaaaagaaatgctgcaagtcttgctaagaagttttgatgtt
ggaaaactcgctttgcattgtcatgatacatatggtcaagccctggcaaatattttgact
ggacttgatctgggaattcgaaccgttgattcgtcagtttcaggtctaggtggctgccct
tacgcaaaaggagcttcaggtaatgttgcaacagaagatgttgtgtacatgttaaatggt
ttgggacttgagtcaggtgtggatatagataaacttgttgaagttggtgaattcatcagt
aaagttctaaatcgggataatggttctaaagtgggaagggctgtgagtgtgaaattctga
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