KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143445875
Entry
143445875         CDS       T11416                                 
Name
(RefSeq) ATP-binding cassette sub-family C member 4-like
  KO
K05673  ATP-binding cassette, subfamily C (CFTR/MRP), member 4
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep02010  ABC transporters
clep04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:clep00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    143445875
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    143445875
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:clep02000]
    143445875
Transporters [BR:clep02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    143445875
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_29 AAA_16 MMR_HSR1 nSTAND1 AAA_21 AAA_22 RsgA_GTPase DUF87 Dynamin_N NPHP3_N MeaB AAA AAA_PrkA T2SSE
Other DBs
NCBI-GeneID: 143445875
NCBI-ProteinID: XP_076801364
LinkDB
Position
2:complement(18888398..18902937)
AA seq 1419 aa
MEKEKKKSKRNPMNQANLLSFITFSWMNDFFRKGYKENLQEHDMYPILKNDSSDVITSRL
KRKWKQEIESARRNNKTPSLLLAVVKTYWFDWVTYGVFGLIEETLHIFTPLFIGGLLSYF
EGKETLTGAYMYATGICLILIGLTLIHHIYFYYLQRLGWHIRAGMCALMYKKTLKLSQKS
LAATTTGQIVNLGSTDVMRFDFVTLFLHYLILAPLQAIVVTYLLWRYLGASSLIGLAIIF
LVSVGQSIMGRQFGRIRAKMALLTDERIRVMNEVITAMRIVKMYTWETSFQKFVDKIRRR
EVKKVLSSSILKACNFSMMFLSTKLVALASFTSYVVAGGHLTASNVFPALSLYNVVRVSM
GIFFPLAIEKYSESIVSLKRIQDFLLLDEQDIEKEKLPVHSDTECSVVIRDFTASWSDEN
EPTLNDVNVEVKSGQLLAVIGPVGSGKSSLLSAILHELKPRLGDMEVKGQVVYAGQVPWV
FSGTVRENILFGEEYDSLRYGAVIKACALTKDLEALAFSDQTLVGERGVTLSGGQKARIN
LARAAYREKSDIILLDDPLSAVDAAVAAQLFHDCICGYMKEKVRVLVTHQLQFLKGADQV
LILKEGAVAGLGTYEELQAKGTDFAALLHKDEEEEKKNDLMLSTALSDDNLNQHHVISED
EIRVGQSLLSLENLHLMTGSMTDIRVLPDDSDQLIRSFSMSDARPNIKHKNVTNNVKTSK
QEESEKMLLNNEQAEFVAPVREEETKVQGSVGWKVYKEYFGTNSCLLFVLSFLLLSNHVT
FVLCDWWMSIWATKSEVFYSRLELMDYNISMEANATVPYNMTLIGTDGYNSSANEGFTET
TDLQFDDTYYIAIFAILTGVFAVLIYARSILQFYYCVISGIHMHDKMFHALLHSHTRFID
TNPVGRILNRFSKDMGQIDEILPATFMDFIYIFFTIITVLILAIIINYFVGIITIPLVAY
FIWLRQYYLKTSRDIKRMEGASRSPVFTHLSSTLQGLTTVRAFKMQEKFEEEFHIRQDAH
SAAWFLFLTGSRWLAMRLDAICAIFIGTVAFFSIVFVSMTDVDAGQVGLTLTYSLMLMGM
FQWGTRQSAEVENLMTSVERIQEYYKIPPEAAHERPENKPPPGWPQYGIITFDNLSYAHY
VDGPDILHRVRLNVKAHEKVGIVGRTGAGKSSLISTLFRLNEYSQGEIYIDGVATSQLGL
TDLRSVISIIPQDPILFAGTMRKNLDIFGDYTDAELWKALEQVQLRPLVENLPMKLESAL
SEAGSNFSVGQRQLVCLARAILRKNKILIIDEATANVDIRTDHLVQEAIRSNFKHCTALT
IAHRLHTIIDCDRVMVLDAGEVVEFEEPHLLLNNKDSVFASMVDSTGKAEATSLKDAAKR
AYEIRHEVTSDVEDGDRSYMARFLPTPGTYDHLELETNI
NT seq 4260 nt   +upstreamnt  +downstreamnt
atggaaaaagaaaagaaaaagagcaagaggaatcccatgaaccaagccaacttgttgtct
ttcattacttttagctggatgaatgatttcttcagaaaaggttataaagaaaatcttcaa
gagcatgatatgtatccaattctcaaaaatgactcgtccgatgtaattacctcaagactt
aaaaggaaatggaaacaggaaatcgaaagtgcaaggagaaataacaaaacaccaagtctc
ttacttgctgtggtgaagacatactggtttgattgggtgacctatggggttttcgggttg
atagaggaaacactgcatatttttactccactatttatcggtggattgctaagttatttc
gaaggcaaagagacattaactggtgcctatatgtatgcaactggaatttgccttatactg
attggacttacactaatccatcacatttatttttactatttacaacgtcttggatggcac
atacgggctggaatgtgtgcgctgatgtataaaaagactcttaaactgagccagaagtca
cttgctgctaccacaacaggccaaattgtcaatctagggtcaactgacgtcatgagattt
gattttgtcactttgtttctgcattatttaatacttgccccattgcaagctatagtggta
acctatcttttgtggagatatctgggggcatcgtcactgattgggcttgcaattattttt
ctggttagcgttggtcagagcataatggggagacaattcggccgaatacgagcaaaaatg
gcccttcttactgatgaaagaattcgggtcatgaatgaagttataactgcaatgagaata
gtgaaaatgtatacttgggaaacatcctttcaaaaatttgtggacaaaataaggagaagg
gaagttaaaaaagtgttatcgtcctccattttgaaggcttgcaacttttcaatgatgttt
ttgtctaccaagctagttgcattagcttcttttacaagctatgttgtcgctggcggtcac
ttgacggcatctaatgtcttccccgctttgtctttgtataatgtcgttcgtgtttctatg
ggtattttctttccattggccattgagaagtattcagagtcaattgtcagtctcaaaaga
atccaggattttcttctgcttgatgaacaagatatagaaaaggagaagcttccagttcat
tcggacactgagtgcagtgttgtgataagagattttactgcttcatggtcagatgaaaat
gaaccaactttgaatgatgttaatgttgaagttaaatccggacaacttctagctgtgata
ggaccagttggttcagggaagtcatcacttctgagtgccatactgcatgagctcaaaccc
aggttgggtgacatggaggttaaaggtcaagtagtttatgctggacaagtgccttgggta
ttttctggcactgttcgtgaaaatatattgtttggcgaggaatatgattcattacgatac
ggagctgttataaaggcgtgtgctttaacaaaggacctcgaagcactggcgttcagtgac
cagactttagtcggagagcgcggtgttacactgagtgggggccagaaagctcgaataaat
cttgcacgggcagcttatcgtgaaaagagtgacattattttactcgatgacccactgagt
gctgttgatgcggcagtggcagcacaacttttccatgactgcatttgcggctacatgaaa
gaaaaagtccgtgtactagtcacacatcagcttcagtttttgaaaggagcagatcaagta
ttgatattaaaggaaggtgctgtggcaggtcttggcacttacgaagagttgcaagcaaaa
ggaacagattttgccgctctactccataaagacgaggaagaagaaaagaagaacgacttg
atgctctctactgcgctttcagatgataatctcaatcaacatcacgtgataagcgaagat
gaaatccgtgttggtcaaagtttgttgtccttggaaaacctccatttaatgacaggatca
atgacagatattcgtgttttacctgatgattcagatcaactaattcgttctttttcgatg
agtgatgcaagaccaaacatcaaacacaaaaatgtgaccaacaatgtcaaaacaagcaaa
caagaggaatctgaaaaaatgcttctcaacaatgaacaggcagaatttgttgctccagtt
agagaggaggagacaaaagttcagggaagtgtgggatggaaggtttataaagaatatttt
ggaaccaacagttgcctcttgtttgttcttagtttccttttactttcaaatcatgtaaca
tttgttctctgtgattggtggatgtcaatttgggcaacaaaatctgaagtcttttattct
cggcttgaacttatggattacaacatatctatggaagcaaatgccactgttccgtataat
atgacactaattggcacagatggatacaacagctcagccaatgaaggcttcactgaaaca
actgatctacaatttgatgacacctattacattgcaatttttgcaatattgacaggcgtc
tttgcggtattgatctatgcaagatcaatattacagttctattattgcgtgatatctggt
atccatatgcatgataagatgtttcatgctctgctgcattcacacacaaggtttatcgac
acaaatcctgttggacgaattttgaatagattttcaaaagatatgggccaaattgacgaa
attcttcccgctacttttatggattttatttacatatttttcacaatcatcactgtgttg
atactcgccatcatcatcaactatttcgttgggatcatcaccataccccttgttgcatat
tttatatggttacgtcagtattatttaaagacgtcacgtgatataaagcggatggaaggc
gccagtcgaagtccagtttttacccatctgtcttccactctccagggactaacaactgta
agagcatttaaaatgcaggagaaatttgaggaagaatttcacatcagacaagatgctcac
agtgctgcatggtttctctttttaaccggctcccgttggctggctatgcggctggacgca
atttgtgctatttttattggcaccgtcgctttcttttcgattgtttttgtgtctatgact
gatgtggacgccggacaggttggccttacgctgacatactccttgatgttgatgggcatg
ttccagtggggcacgaggcagagtgccgaggtcgagaatttgatgacgtcagtcgaacgt
atccaggaatattacaagataccaccggaggccgctcacgagcgccctgagaacaaacca
ccccctggctggccacaatacggaatcattacttttgataatctgtcctatgctcattat
gttgatgggcctgatatccttcatcgggttcgtttgaacgtaaaagctcacgaaaaggtg
ggcatagttggacggacaggagccggcaaaagctctttgatctccactttgttccgcttg
aatgaatacagccagggagagatctacatcgacggagtagcaacatcccaacttggactc
acagaccttagatccgtcatctccatcatcccacaggacccgatcttgtttgccggaaca
atgaggaaaaacctggacatttttggtgactacacggacgctgagttgtggaaagctcta
gaacaagtacaacttcggccgctggtggagaatttaccgatgaaattagaaagtgctctt
tccgaggccggctctaatttcagcgttggtcaacggcaacttgtatgcctcgctcgcgcc
atcttgcggaagaataaaattttgattattgatgaagcgactgccaatgtagacattagg
accgaccatctcgtccaagaagcaataagaagtaatttcaagcattgcacagccctcacc
atcgctcatcgtcttcacaccatcatcgactgcgatcgtgtcatggttctggatgcagga
gaagttgtggagtttgaggaaccccatcttcttttgaataacaaagatagcgtctttgca
tcgatggtcgattcaactggcaaagcagaggccacgtcacttaaggatgccgctaaaagg
gcctacgaaattcgccacgaagttacctctgatgttgaagatggtgaccgcagctatatg
gcccggtttcttccaacaccgggaacctacgaccatcttgaacttgaaaccaatatttaa

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