Clavelina lepadiformis (light-bulb sea squirt): 143445920
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Entry
143445920 CDS
T11416
Name
(RefSeq) heparanase-like
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00531
Glycosaminoglycan degradation
clep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
143445920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clep00536
]
143445920
Enzymes [BR:
clep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
143445920
Glycosaminoglycan binding proteins [BR:
clep00536
]
Heparan sulfate / Heparin
Enzymes
143445920
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
143445920
NCBI-ProteinID:
XP_076801439
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All DBs
Position
2:16093045..16097888
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AA seq
535 aa
AA seq
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MLAHLFVKCWMIVSTLACSKIYFRIDEHFTLATINPLSPSVTVPSAILFRQRWIDYINDP
KLVTLIKALGPMYARVGGIQADFVRYVPDQNTNIEEKLKSTIAPTCNPPPRDQRRFDAHG
KWVEREMTAGQTLNQDKERIVRNITFSSTDWVNLNEFCKCVGWKLIFALNLLQRKCLAWD
PSNAEKLLKYTEKRRYKVDWELGNESNYYNAHPLWGITLTPEEVGSAFLRLRELLEESKW
LKSSLVVGPDMNQLGNDVSARFLNRFLQTTGGAIDRITVHQYDFGAPNATLYDFLSPRNM
NKIIAQITWVKRFVNRYVPNTPIWLGETSSAFGGGVKGFSDSFLDGFTWIDKLGTTARLG
VDLVIRQSLFAERYSLIDKNFDPLPDFWLTLLYRRIVGHQVLNLHLQECNFTHCRILKNE
DVRMYAHCAKRSLYMQGNVVVYFVNVRPNPVRIAIVSHHKTKHRNELYLFQPSIPGNLTS
KEVLLNGKVLRLSSTLSIPPLLPIRLSHGALVDGLNIPGYSYGFLVLKTRFTACL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgttggctcacctttttgtgaaatgctggatgatagtttcgaccttggcttgttcaaag
atttattttcggattgacgaacactttaccctggccacgattaaccctttatctccgtcg
gtaactgttccttctgcaattttattccgacagcgttggattgattacatcaatgatcca
aaactggtgacattgataaaagcacttggaccgatgtacgcgagggtcggtgggatccag
gccgactttgttcgctatgttccagatcaaaatacaaacatagaagaaaaattgaaaagt
actattgccccaacttgcaatccacctccaagagatcagagacgatttgacgctcatgga
aagtgggtagagcgcgaaatgaccgcagggcaaacactgaatcaggataaagagcgaatc
gtcagaaatatcaccttttcaagtacagattgggtgaatcttaatgaattctgcaaatgc
gttggctggaaacttatctttgctcttaatttacttcaaagaaaatgcttagcttgggat
ccttcaaatgctgaaaaactactaaaatacactgaaaaacgtagatataaagtggattgg
gaattgggaaacgagtcaaactactacaacgctcatccgctctggggaataactttgacg
cccgaggaagtcggaagtgctttcttacgcctcagagagctgctagaagaatctaaatgg
ttaaaatcatcgttggttgttggaccggatatgaaccaattaggtaacgatgtgtccgcc
aggtttttaaaccggttcctacaaactactggtggcgccatagatcggattaccgttcat
cagtacgattttggggctccaaatgccacgctgtatgatttcttaagcccacgtaatatg
aataagatcattgctcagataacctgggtaaaaagatttgtgaatcgttatgtaccaaat
actccaatttggcttggtgaaacctcatcggctttcggaggcggagtaaagggcttttcc
gatagttttctcgacggatttacgtggattgataaattgggtacaactgcacgtttgggt
gtagacctagttattcgacaaagtctttttgcagaacgatactctcttattgacaaaaac
tttgatccattacctgatttttggctgacacttctttacagacgtattgtcggacatcaa
gtattaaatcttcatctacaagaatgtaattttacccactgccgtattcttaaaaatgaa
gatgtaagaatgtatgcacactgtgccaagaggtccttatacatgcagggaaacgtcgtt
gtgtattttgtcaacgtgcgaccaaatccagtgcgaatagccattgtaagccatcataaa
acaaaacatcgaaacgaattgtatctctttcaaccaagtattcctggaaatcttacgtcc
aaagaggttctcctaaatggaaaggttcttcgactctccagtactttgtctattcctcca
cttttaccaatccgtctgtctcatggagcacttgtcgatggtctcaatattcctggttat
tcgtatggttttctcgttttaaagacgcgctttacagcttgcctatga
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