Clavelina lepadiformis (light-bulb sea squirt): 143445931
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Entry
143445931 CDS
T11416
Name
(RefSeq) sodium- and chloride-dependent betaine transporter-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
143445931
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clep02000
]
143445931
Transporters [BR:
clep02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
143445931
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NCBI-GeneID:
143445931
NCBI-ProteinID:
XP_076801451
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Position
2:complement(2666514..2670969)
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AA seq
571 aa
AA seq
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MREKWTNRFDFLFVTVGSAVGLGNMWRFPYLCYQSGGGAFLIPYLVTLLIVALPQLILQV
SLGQHTSLSPVKAWEMVPTMKGIGYAATVYAVLCNVTYSTVLAWTLRYLYASMSPVLPWM
TCTNSWNTLGCFVPDNNQSTSMSLYVNASGNNSTRNTSEIASSVAEFWTRGVLGLSEGLT
DIGRFQTPLVVCHTITWTLIFLAMLKGANWTSKVTYVTSTLPIFILVAVLVRGVTLDGSY
EGIIHFVKPNMTKLFQPQVWKDALLQNLYSLSIGSGCMMTMGSFNSYHHNFLRDAIALSV
VNSCASFVAGIAVFSTLGFMAKQQNTTVDLVAESGPGLVFTVYPQALSMMPGSQFWSVAF
FLMLFLLGLDSLFVIIEAVSTVIIDQFPAVFDKQLKKIFMRFCLCCFYFFAALITVTQGG
MYYIHLIDNFSSTSWALLFSGGCECIAISWIFGLDRFYEIMCDMLQFRPRFPWFKYCWKY
VIPLLSAGLFIYCLILYKPLVYNRTYEYPAWSIGVGWLLSLSSFLWIPGYAGYYLIKKRC
LEQDKRKTSDAGKDQMEMEELKVSIAESSEL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaaaatggacaaatcgttttgattttcttttcgtaacggtcggctctgcagtt
ggcttgggaaatatgtggaggtttccttatctatgttaccaaagcggaggaggagctttt
ctaattccatatttggttacattacttattgtggctctcccccagttaatactacaagtg
tctttgggccaacacacaagcttgtcacctgtgaaagcctgggagatggttccaacaatg
aaagggattggatatgctgcaaccgtttacgcggtactctgtaacgttacatattcgact
gtacttgcctggacgttgcggtatttgtacgcaagcatgtctcctgtcctcccatggatg
acgtgcaccaactcgtggaacactttgggctgctttgtgccagataacaaccaatctacc
agtatgagtttatacgtcaacgcatctgggaataactcaactagaaacacatcggaaatt
gcatcatcggttgctgagttttggacgagaggcgttttgggcttatctgaaggtctcact
gatattggaaggtttcaaacccctttggttgtctgccacactatcacgtggacacttata
ttcctcgctatgctaaaaggcgccaactggactagcaaggtcacctatgtgacgtcaact
ctgccaatctttattcttgttgcggttctggttcgtggcgtcaccttggacggttcatac
gagggaataattcactttgtaaagccaaatatgacaaaattattccaacctcaggtgtgg
aaagatgctcttttacagaacttgtattcgttgtctattggctccggttgcatgatgacc
atgggaagctttaattcttaccatcataactttttgagggatgctatagccctttctgtt
gttaatagttgcgccagttttgtagctggtattgctgtgttttcgacgcttggatttatg
gcaaagcagcaaaatacgacagtcgatctagtcgcggagtcaggacccggtctggttttc
actgtttatccgcaagcactttccatgatgccggggtcacagttttggtcagttgctttc
tttctgatgctatttctgcttgggctagacagtttgtttgtcatcatcgaagctgtttcg
actgtaattatcgaccagtttccggctgtgttcgacaaacaactgaaaaagatcttcatg
cgattttgcttgtgctgcttttatttcttcgcagctctcataacagtgacacagggtgga
atgtactacattcatctcattgacaacttttcttcaaccagttgggctcttctcttctct
ggaggttgtgagtgtattgcaatctcgtggattttcggtttagatcgtttctatgaaata
atgtgcgacatgttacagttcaggccaaggtttccgtggtttaaatactgctggaaatat
gtcatacccttgctatcagcgggtctctttatttactgtcttattctgtacaagccgctg
gtgtataaccgtacatacgaatacccagcgtggtctataggggtcggttggttgttgtca
ctaagtagctttttatggatccctggatatgctggttattatctaatcaagaaaagatgc
ttggagcaggacaagcgaaaaacgtcggatgcagggaaggatcagatggaaatggaggag
ttaaaagtttctatcgcagaatcctcggaactttag
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