Clavelina lepadiformis (light-bulb sea squirt): 143445977
Help
Entry
143445977 CDS
T11416
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03030
DNA replication
clep03410
Base excision repair
clep03420
Nucleotide excision repair
clep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143445977
03410 Base excision repair
143445977
03420 Nucleotide excision repair
143445977
03430 Mismatch repair
143445977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clep03032
]
143445977
03036 Chromosome and associated proteins [BR:
clep03036
]
143445977
03400 DNA repair and recombination proteins [BR:
clep03400
]
143445977
DNA replication proteins [BR:
clep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
143445977
DNA Replication Termination Factors
ELG1-RFC complex
143445977
Chromosome and associated proteins [BR:
clep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
143445977
DNA repair and recombination proteins [BR:
clep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
143445977
Check point factors
HRAD17(Rad24)-RFC complex
143445977
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
Viral_helicase1
AAA_22
AAA_14
RCF1-5-like_lid
nSTAND_NTPase5
Rad17
Mg_chelatase
AAA_16
RuvB_N
AAA_assoc_2
nSTAND3
AAA_11
ABC_tran
AAA_19
DNAX_ATPase_lid
AAA_18
AAA_28
AAA_25
AAA_24
NTPase_1
Zeta_toxin
AAA_23
AAA_30
MeaB
AAA_5
Motif
Other DBs
NCBI-GeneID:
143445977
NCBI-ProteinID:
XP_076801519
LinkDB
All DBs
Position
2:17771809..17778541
Genome browser
AA seq
345 aa
AA seq
DB search
MDCQPGSSGDNSFSTNLKSKKGYELPWVEKYRPTKLSDVVGNEATVSRLDVFAREGNVPN
IIIAGPPGAGKTTSILCLARTMLGPAYSNAVLELNASNDRGIDVVRNKIKMFAQKKVTLP
KGKQKIIILDEADSMTSGAQQALRRTMEIYSKTTRFALACNQSDKIIEPIQSRCAILRYS
KLTDAQILSRIMEVIDKENVRYTDDGLEAIIFTAQGDMRQALNNLQSTYQGFGFVNGENV
FKVCDEPHPLLIKNMLDHCVSGNLDEAYKVINHLWNMGYSADDIITNIFRVVKTHDMAEY
VKLEYIKLIAQTHMRIVQGINSLLQLSALIARLCRITIDQPTTAT
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggattgtcaaccaggatcaagtggggataattctttttcaactaatttgaagtctaag
aaaggatatgagcttccttgggtggaaaagtaccgaccaacaaaattaagtgacgttgtt
gggaatgaagcaactgtaagtcgcttggatgtgttcgcaagagaaggaaatgttcccaat
atcataattgctgggcctcctggtgctggaaaaaccacaagcattttatgtcttgcgaga
actatgctggggccagcttacagtaatgctgttttggaactcaatgcttcaaatgacaga
ggaattgatgttgttcgaaacaaaatcaaaatgtttgctcagaagaaagtaactttgccc
aaaggcaagcaaaaaattataattttagatgaagcagatagcatgactagtggggcccag
caggcattacgaagaactatggagatctacagcaaaaccactcgttttgctttggcctgt
aaccagtctgataaaataatagaaccgattcaatcgcgttgcgcaattttaagatatagc
aagcttacagatgcccagattcttagccgcattatggaggtgattgacaaagaaaacgtt
cgttatacagatgatggcttggaagcaatcatttttactgcacagggtgatatgagacag
gctctaaacaatcttcagtcaacatatcagggatttggatttgtaaatggtgaaaatgtc
tttaaagtttgtgatgaaccacatcctttgttaataaaaaacatgcttgaccattgcgtg
agtggaaatcttgatgaggcatacaaggtgattaaccatttatggaacatgggatattct
gctgatgacattataacgaatatatttcgagtggtaaaaactcatgatatggccgaatat
gtcaagctggagtatatcaagcttattgcgcaaactcatatgaggatagtccaaggcata
aactctcttttgcaactgtctgctctcattgctagactctgccgtattaccattgaccag
ccaactacagcaacatga
DBGET
integrated database retrieval system
