Clavelina lepadiformis (light-bulb sea squirt): 143446161
Help
Entry
143446161 CDS
T11416
Name
(RefSeq) TBC1 domain family member 2B-like isoform X1
KO
K20166
TBC1 domain family member 2B
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143446161
Membrane trafficking [BR:
clep04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
143446161
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
FliJ
PH_11
DUF6118
Motif
Other DBs
NCBI-GeneID:
143446161
NCBI-ProteinID:
XP_076801796
LinkDB
All DBs
Position
2:26081258..26087180
Genome browser
AA seq
963 aa
AA seq
DB search
MDCPTGTLINLNDEEGSSSNLVRENSQERKGNVNKKLGLTPLHLDQSNKTDSTLSDVKEK
VQLCGYLSKISYNGPIKSSRTRWFTYNPDSCEMIYYRSSGSDGGNVPVGKIPLRRASFNF
SASDLSDNIFTVTSDGTTHTLQACDRKTLLWWLQELQAGRRSFNLKQSDETKEQEEWHGT
ILGSSLFWVPNVNNTSLGLLDVRPGSKSPAAENEKLEFNIVPHLEAPPDTVGEQAATLHK
PRSATLLSQSALSSLSNKIPNLGTLNTAFSNVGEAAMKGLRSQAQKLRPPSLDRRLSETN
VDGGTIQKSLSASSSASNLSTMGKEINYQAFVSNLKETIQHMREEIILLKNKLDTKEEAI
EMLKLELQKYENLQAQLSKFDGFSETDYKLRSEVIGLKLSNEGLEQDKQDAAKREEELKE
RVGMLEEMLKIKDDVVVQLSNEVFQLESSNKSLTSDHRKLKKEKNEEFVILTPADASEHI
DELKTKVDGYTMQNKFLNNEILELSNLRQVDAKRLQSLQDKVHQQEAEHCQLHSKYLVLL
SEMNKPRTESVGLAVAGTKIETSDSDRREMVKILIKEALTDSELKHIEDSDDLRKRKYDQ
YGFSQVVEDDAESSLLTAASRLEKRSSDILQSLSQYKTSIAVKWQNFLTINKELQRGEDL
KALVRLGVPHELRPQVWSWMVNIRTSHIRQKLELDRSYYKDLVHSKEAQLPSKQIELDLL
RTLPNNRHFSSLSSSGIDQLRRVLRAYSIHNPSIGYCQGLNRIVAVSLLYLCEEEAFWCL
VAIVECIMPPDYYSTTLTASQADQRVFRDLMAEKLPRLHRHLETAGVDSSLITFNWLLCI
YCDNVPPDTMLHIWDCLLYEGSKVLFRFGLAFFKYVEDEILQLGDYMAIFNFLRNLSFRM
YDVKVLAQTAFSGMNPFPMRKITRLRQIHMEKVRAELRELDNIRSGFTTIRREARREFDS
DED
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggattgcccaacaggaacgttgatcaatcttaatgatgaggaaggatcttcgtcaaat
ttggtgagagaaaactcacaggagaggaagggaaatgtcaacaaaaaacttggcctaact
ccacttcacctcgatcaatccaacaaaactgactcaactttatcagatgtaaaagaaaaa
gttcaactttgtggatatttgtcaaagatttcttacaatggcccgatcaaaagttcacgc
acgcgttggttcacgtacaacccagattcatgcgagatgatttattatcgatcctcaggg
tcagatgggggcaacgtcccagtggggaaaatcccacttagaagagcttcattcaacttc
agtgccagtgacttgagtgataatatattcactgtaacatcagatgggaccacccacaca
ttacaggcttgtgacagaaaaaccctgttgtggtggcttcaggaacttcaagctggaaga
agatcgtttaacttgaagcaaagtgacgaaacaaaggagcaggaggaatggcacggaacc
atactgggctcaagtttattctgggtcccgaatgtgaacaacaccagcctgggtcttctt
gatgtcagacctgggtccaagtctccagctgcagagaatgaaaagttggagtttaacatc
gttccccatttggaggcgccaccagacacagtgggtgaacaagcggcaactttgcacaaa
ccaagatcggcaactttactctcgcaatcagctctctcttcattaagcaacaagataccc
aacctgggaactctgaacacagctttctcgaatgttggtgaggctgcaatgaaaggtttg
cggtcacaagcacagaagttgcgaccgccgtcgcttgacaggcgattgtcagagacgaac
gttgatggcggaacaattcagaagtcgttatcagcttcatcgtccgcgagcaacttgagc
acgatggggaaggaaattaattaccaggccttcgtatcaaatttgaaagagactatccag
catatgagggaggagataattttactgaagaataaactcgacacaaaggaggaggccata
gaaatgctgaagctcgaattacaaaagtatgagaatttacaagctcaattgtcaaagttc
gacggattctcggaaacagactacaaacttcgatcagaggtgatcggcttgaaattgagc
aacgaaggactcgagcaggataagcaggatgcagcgaagagggaagaagagctcaaggag
cgtgtcgggatgttggaggagatgttgaagatcaaggatgatgtggtcgtacaactgagc
aatgaggtgtttcagcttgaatcatcaaacaagtctctaacgagtgatcaccggaagtta
aagaaggagaagaatgaagaatttgtgatccttactccagcggatgcgagcgaacacatt
gatgagctcaaaacaaaggtggatggatatacaatgcaaaacaaatttctaaacaatgag
attttggaactttcaaatctgagacaggtcgatgctaaaaggcttcaaagtctccaagat
aaggtccatcagcaggaagcagaacattgccagctgcacagcaagtacctcgtcctcctc
tccgagatgaacaaaccgaggacggaaagcgtcggactagctgtggccgggacaaagatt
gagacgtccgacagtgatcggcgcgagatggtgaagatcctcatcaaggaagctctcaca
gactcagagctgaaacacatcgaggacagcgatgacctcagaaagcgaaagtacgaccaa
tatggcttctcgcaagttgttgaagatgatgctgagtcatcattgcttactgcagcaagt
cgattggagaaacgttcgtcggacattcttcaatcgctgagtcagtacaagacgtcgatt
gctgtgaagtggcaaaacttcctcaccataaacaaggagcttcagagaggagaggatctt
aaagcgctggtgagactcggtgtcccgcatgaacttcgaccccaggtgtggagctggatg
gtcaacatccggacctcccacattaggcagaagctggagctggatcggtcgtattacaag
gacctggtccacagcaaggaagctcaactcccgtccaagcagattgaactcgatttattg
cgaacgcttcccaataatcgacatttctcatccttgtcctcatcaggcatagatcaactg
aggagagttttgagagcttacagcatccacaacccaagcatagggtactgccaggggctg
aacaggatagttgcggtctcgttgctttatctgtgcgaggaggaagcattctggtgcctg
gtggcgatcgtggaatgcattatgccaccggactactacagcacgaccctcaccgcttcc
caggcggatcaaagagtttttcgagacttgatggccgagaaacttcctcgtctccataga
catcttgaaactgctggtgttgattcgtcgttgatcacttttaactggttgttgtgcatc
tactgcgacaacgtacctcccgacaccatgctccatatatgggattgcttgctctatgaa
ggatccaaggtgctcttccggtttggactggcgttcttcaaatatgttgaggatgagatc
ctgcagcttggtgactacatggccatcttcaacttcctcaggaacctctccttccggatg
tatgacgtcaaggtactggcgcagacggcgtttagcggaatgaatccgttcccgatgagg
aagattactcgactccgtcagatccacatggagaaggtgcgggcggagctgagggagctg
gacaacatccggagcggattcaccacgatcaggagggaagcgaggcgggagttcgacagc
gacgaagattga
DBGET
integrated database retrieval system
