Clavelina lepadiformis (light-bulb sea squirt): 143446213
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Entry
143446213 CDS
T11416
Name
(RefSeq) integrin beta pat-3-like isoform X1
KO
K06464
integrin beta 2
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04145
Phagosome
clep04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
143446213
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
143446213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143446213
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clep04147
]
143446213
04515 Cell adhesion molecules [BR:
clep04515
]
143446213
04090 CD molecules [BR:
clep04090
]
143446213
Membrane trafficking [BR:
clep04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
143446213
Exosome [BR:
clep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
143446213
Cell adhesion molecules [BR:
clep04515
]
Integrins
Integrin beta subunits
143446213
CD molecules [BR:
clep04090
]
Proteins
143446213
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143446213
NCBI-ProteinID:
XP_076801866
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Position
2:complement(8085806..8100825)
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AA seq
846 aa
AA seq
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MVRYSLCFVLFFLVTQRFVSCEDLTETQINKLCEDLNIATCDQCIQAHPDCAWCAVPLSG
AKIKRCRTHRKLKQLGECPSDQIKFLESTTPAKNDTPLSEPSLSQLGPVVQLQPQVIQIN
IRRGDRVKFNITFRKVTDYPVDLYYLMDLSHSMLDDLKTLQRLGQSLADDIKTNVTSNIQ
MGFGTFVDKVMMPFASTVTEQLQNPCAKNQEDNVCAPPFGFKHQQSISDQVEKFRTSVAN
TTISGNIDSPEGSFDALMQIAVCGDKIGWRADATHLVIVTTDASFHMALDGKLAAILEAN
DMKCHLSKGANPNLPADTVYDKSKYLDYPSIGQLRAAFKDNKIQPIFAVTKEVRSLYEEL
RQLIPNSYVDELANDSSNIIGIISAAYNQLRGKLDMSLDENIPPEISLRYRVLCPNRTDW
KNNSLSCDQIQIGSEIVYEFEAIAEGCPSQNIMRPLTFTSSSLQEDVKIFFNFLCNCECS
KHPVVSSVNCSTNGSLVCGVCECDSGHEGAQCQCIQTQADVSLLSQCKQNGENNDDICEG
NGVCECGTCVCNEGYRGQFCQCSSKGCPTSNDGICGGADKGTCENCDGIAKCNCKNGWTL
HPEIQTCNCHDDLCKANVTSDVLCSSNGECDCNRCKCFNDSTIYSGQFCDVCINPVCKPV
VECEGTSMQSCAQCVNEAQRLRENQNEKCFDKCADIDYTLLTSIPDCTNCFDSSCSKFCE
DIDVNIAAPKDCQAFLANSECTVQFDIVWRKSTNDYQLLVKEFDKAQDCPQPINPLLIVL
PIVAGIVLLGLLALIAWKIFQTMRDKREWLSFENEMKQSKWTKDINPVFQKPTSRFENPS
YGGEGH
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgttattcgttgtgttttgtgttatttttcttggttactcaaagatttgtatct
tgtgaagatttgacagagacacaaatcaacaaactatgtgaagacttgaatattgcaacc
tgtgaccagtgtattcaagctcatccagactgtgcgtggtgtgctgtacctctttctggg
gcaaagattaaaagatgtcgaacacacagaaagcttaaacaacttggagaatgcccttcg
gatcaaatcaaatttttggagagcactactccagcaaagaatgatacacctttgtcagaa
ccaagcctttcacaactggggcctgttgtccaactacaaccacaggtcattcagatcaat
atcaggagaggtgaccgtgttaaatttaatatcacattcagaaaagttactgattatcct
gttgatctttattatttgatggacctctctcattctatgttggatgacttgaaaactttg
caacgccttggacaaagcctggcagatgatattaagacaaatgttacgagcaatattcag
atggggtttgggacttttgtagataaagtgatgatgccctttgctagtactgttaccgag
caattacaaaacccatgtgcaaaaaaccaagaagataatgtttgtgctccaccttttgga
tttaagcatcaacaatcaatatctgatcaagtggagaagtttcgtaccagtgttgcgaac
acaacgatctctggcaatattgattcaccagaaggttcttttgacgctcttatgcaaatt
gctgtgtgtggtgataaaataggttggagagcagatgctacacatttagttatcgtgact
actgatgcttcttttcatatggctcttgacggaaagttagctgcaatcttggaggcaaat
gacatgaaatgccatctgagcaagggtgccaatcccaatcttcctgctgacaccgtgtat
gacaagagcaagtacttagattacccatccattgggcagttacgtgcggctttcaaagac
aacaaaatccagcctatatttgctgtaactaaagaagttcgtagtctctatgaggaatta
cggcaactcatacctaactcatatgtggatgaacttgcaaatgattccagcaatatcatt
ggaattatatcagctgcatacaatcaactaaggggtaagttagatatgtctcttgatgaa
aatattcctccagagatttctttgcgctacagagttttatgccctaaccgcactgactgg
aaaaacaatagcttgagctgcgatcaaattcaaattggcagtgaaattgtctacgaattt
gaagcaattgctgaaggctgtccatcgcaaaatataatgcggcccttgacttttacttca
agctctcttcaggaagatgtcaaaatattttttaattttctgtgcaactgtgaatgttca
aaacaccccgtagttagcagtgttaactgcagtacaaatggatccttagtttgtggtgtt
tgtgaatgtgattctggtcacgaaggcgcacagtgtcaatgcattcagactcaagccgat
gtttctcttttatcacaatgcaagcaaaatggagaaaataatgatgacatatgcgaggga
aatggtgtatgtgagtgtggaacatgtgtttgtaatgagggttatcgaggacaattttgt
cagtgtagcagcaaaggctgtcccacttctaatgatggaatatgtggaggtgctgacaaa
ggaacctgtgagaactgtgatggaattgctaaatgtaattgtaagaatggctggactttg
catccagagatccaaacatgcaattgccacgatgacctttgcaaagccaatgttacaagt
gatgttctttgcagtagcaatggtgaatgtgactgtaaccgatgcaaatgctttaatgat
tctactatttatagtggacaattttgcgacgtctgcattaatccagtttgtaaacctgtg
gttgagtgtgaagggactagcatgcagtcatgtgcacagtgtgtaaatgaagcacagaga
ctgagagagaatcaaaatgaaaaatgttttgataaatgtgccgacattgattatactttg
ctgacaagcatacccgattgtaccaattgctttgatagctcttgcagtaaattctgtgaa
gacattgatgtcaacattgctgcgccaaaagactgccaggcgtttcttgccaatagtgaa
tgcacagtgcagtttgatatagtgtggaggaaaagtacaaatgattaccaactgttagta
aaagagttcgataaggcacaagattgtccccaacctattaacccactgttgattgtacta
cccattgtggctggaatagtactattgggtttgttggctttgatcgcttggaagattttt
caaaccatgcgtgacaaacgagaatggttgagttttgaaaatgaaatgaagcaatctaaa
tggaccaaggacattaatccagttttccagaagcctacgtcaagatttgaaaatccctca
tatggtggtgaaggtcactag
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