Clavelina lepadiformis (light-bulb sea squirt): 143446653
Help
Entry
143446653 CDS
T11416
Name
(RefSeq) carbohydrate sulfotransferase 11-like
KO
K01017
chondroitin 4-sulfotransferase 11 [EC:
2.8.2.5
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
143446653
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clep01003
]
143446653
Enzymes [BR:
clep01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.5 chondroitin 4-sulfotransferase
143446653
Glycosyltransferases [BR:
clep01003
]
Unclassified
Sulfotransferases
143446653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_2
B_lectin
PGPGW
DUF7889
Motif
Other DBs
NCBI-GeneID:
143446653
NCBI-ProteinID:
XP_076802510
LinkDB
All DBs
Position
2:5015950..5019686
Genome browser
AA seq
319 aa
AA seq
DB search
MLMFQRIKVFAFIVLVGVLLWSMEYQWASHFNKQLREVFEPAEDIYQKAERYHFEVLRII
QEERKATVNRACGEWKNTCVRHPESFSGIHSRSYNVGVCDIPECGGSGWRNIIYEMDKND
ISIGNNRTISPEDSFKIIVVRHPFQRLAAAYRYQLRVESSAYFAQLSRTIVEKYKHQRNS
SNAKNQAYHGSNDVLTFEDFVNFVLYDENAQESRLWQTFSESCNLCDVRYDAILKYETLE
EDFNYLQQTLGFQDKYKDMFFKNNFMTVADYKVETSFKQLATNLQDALYKKFLPDFQMFG
YQLPTWLCKRNDITNFLEN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgttccagagaatcaaggtatttgctttcatcgttttggtaggcgtcttgctg
tggtccatggaatatcaatgggcatctcattttaataagcagttgagagaagtatttgaa
cctgctgaagacatttaccaaaaagcagagcgatatcacttcgaagtcctccgcattatc
caggaagagcggaaagctacggttaacagagcttgcggcgaatggaaaaacacttgcgtc
cgacatcccgagtcgttttcgggtatacattctcgcagttacaacgtcggtgtctgcgac
atacctgagtgtggcggttccggttggagaaatataatttatgaaatggataaaaatgac
atttctattggcaataacagaactatttcccccgaagacagcttcaagataattgtggtt
cgtcatccttttcaacgtctagcggcggcatacagataccaactcagagtcgaaagctct
gcttactttgcgcagctttccagaacgatcgtggaaaagtacaaacatcaacgaaactca
agcaacgctaaaaaccaagcttaccatggttccaatgatgtgctgacctttgaagatttt
gtaaatttcgtattgtatgatgaaaatgcacaagaaagcagattgtggcagacttttagc
gaaagttgcaatctctgcgatgttcgctatgatgctatattgaagtacgaaacgcttgag
gaagacttcaactacttacaacaaactttaggctttcaggacaaatacaaagatatgttt
tttaaaaacaactttatgacggtggctgattataaagttgaaacatcttttaagcaactg
gccaccaatttacaagacgctctgtacaaaaagttccttccagatttccaaatgttcggt
tatcagcttccaacgtggttgtgtaaacggaatgacataacaaactttttggaaaattaa
DBGET
integrated database retrieval system
