Clavelina lepadiformis (light-bulb sea squirt): 143447021
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Entry
143447021 CDS
T11416
Name
(RefSeq) heparanase-like
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00531
Glycosaminoglycan degradation
clep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
143447021
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clep00536
]
143447021
Enzymes [BR:
clep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
143447021
Glycosaminoglycan binding proteins [BR:
clep00536
]
Heparan sulfate / Heparin
Enzymes
143447021
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
VSP
Motif
Other DBs
NCBI-GeneID:
143447021
NCBI-ProteinID:
XP_076803043
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Position
2:16086492..16092135
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AA seq
543 aa
AA seq
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MLKCIALWFLSLAWNSSASKIRFFIDTSVPVHVVNPLSPSVAMGLGIFEYRWVDYFRDEK
FLTLARGLGPSYLRVGGTKADFITFYQNDEDRVSSYIKQRSLVEGSEHQCQQQLRDEEVF
QAHRKWADAQQLLFKEEKRKFGIRQVLKPLKMTAADWDKLNEFCQCVGWKLVFGLNLLKR
DGEVWNSTNAEQLLQYTEYKYNVNWELGNEPDSYFHKTGISLSAEQVGDAFLRLKDILQK
SGWWNSSMILGPDANRIGTRSAGQFLKNFLETAASTITGVTFHQYYLNGKTATPEEFLNK
TVLNSIIPKLEQVRKIVQRTAHGRPLWLGETASAFGGGAPGMSNSFIDGFTWLDKLGMAS
KMGVDMVIRQSFIQSNYDLVDSNFDPLPDYWLTLIYKRLVGPQVLNVTLQKCLQKTGSCR
SVTHGHFRMYAHCTKSTVYPGGSVVIYFINLKPKPVKVTMKPLRSKVAKPELFLLEPGVP
GNLTSNEVRLNGKLLRLTSAGTFPPLQPTYLHPRALTKGFRIPGHSFGFLALNKFRANAC
FQE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatgtattgcgctttggtttttgagtcttgcgtggaactcttctgcatcaaag
atacgtttcttcatcgacacaagtgtaccagtgcatgtggttaacccgctatcaccttcg
gttgccatgggactgggaatatttgaatatcgctgggttgattattttagagacgaaaaa
tttctgaccctagctagaggtctgggaccttcctatcttcgcgtaggcggaactaaagcc
gattttataactttctaccagaatgatgaagacagggtatcctcttatataaaacaacgt
tctctagtcgagggatcagaacatcaatgccaacaacagctacgtgacgaagaagttttt
caagcacacaggaaatgggcagatgcacaacagcttctctttaaagaagaaaaacgcaaa
tttggaattcggcaggttttgaaaccgcttaaaatgacagccgcagactgggacaagtta
aacgaattttgtcaatgtgttggatggaagcttgtttttggtttaaatttactcaaacga
gatggagaagtttggaattctaccaacgctgagcaattgctgcagtatacagaatacaaa
tataacgtcaattgggagctagggaatgaaccagattcttactttcacaagactggaata
tccttgtcagcagagcaagtgggagacgcatttttgcgtctcaaagatatactccaaaag
tctggttggtggaactcttctatgatccttggtccggatgctaaccgcattggaacaaga
agtgctggacaatttttaaagaactttttggaaacagctgcaagtaccattactggcgtc
acatttcatcagtactacttgaacgggaaaactgctactcctgaagaatttttgaataaa
acagtgttgaacagcattattcctaaacttgagcaagtaaggaaaatagtgcaaagaacc
gctcacggtcgaccactctggcttggtgagactgcatctgcgtttggaggaggtgctcct
ggaatgtcaaactctttcatcgacggtttcacatggttggataaactcggtatggcgtcg
aaaatgggagtggacatggtcataagacaaagcttcattcaaagcaattacgatcttgtc
gatagcaattttgacccattgcccgattattggttaactcttatctataaacgactggtc
ggaccacaggtgttaaatgtcactttacagaagtgcttacagaagaccggatcctgtaga
tcagttacacacggtcactttaggatgtatgcgcactgtacaaaaagcacggtgtatccg
ggcgggtcagtcgtaatatattttattaacctaaagccaaaacctgtcaaggttacaatg
aaaccattacgaagtaaagttgccaaacctgagctatttttgcttgaaccgggcgttcca
ggaaacttaacctctaatgaagtccgtttaaatggaaagcttcttcgtctaaccagcgct
ggcacttttccaccacttcagccaacctatcttcatccacgggcacttaccaagggattt
cgaattcctggtcattcatttggattcctagccctgaacaaatttcgtgccaacgcctgt
ttccaggaatag
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