Clavelina lepadiformis (light-bulb sea squirt): 143447264
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Entry
143447264 CDS
T11416
Name
(RefSeq) hairy/enhancer-of-split related with YRPW motif protein 2-like
KO
K09091
hairy and enhancer of split related with YRPW motif
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
143447264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clep03000
]
143447264
Transcription factors [BR:
clep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
143447264
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_IRO3
bHLH_NPAS4
FeoB_C
bHLH_INO2
DUF4363
DUF6666
Motif
Other DBs
NCBI-GeneID:
143447264
NCBI-ProteinID:
XP_076803394
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All DBs
Position
2
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AA seq
265 aa
AA seq
DB search
MLQITLKSVAEAWETCTYERVVSCALAENVSSTLIRFFTKRPIFRMKRTHHECRPILPYS
NEKPIQSLVAARKKRRGVIEKRRRDRINNSLAELRRLIPATAHKKSSPKMEKAEILQMTI
DHIKAIQNFSGFRPFGSISGFEIDYHSFGFRECLDEVRRFFMYIHGTKISSITNLVSHLQ
DKLNRVQAADMSSRLYFRRLDDTIYPRQVKTSAGLTSNLRNHFNLALMPQISQQMSWQTM
SPYTLPYRIPHQRNVLIESWNKVCL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaatcacactcaagagtgtggcagaagcgtgggaaacatgcacgtatgaacgt
gttgtatcttgtgcattggccgaaaacgtctcatcgaccttgattagattttttaccaaa
cgtccgatttttcgaatgaagcggacacatcatgaatgtaggcctattttgccgtactcc
aacgagaaaccgattcagtctttagttgctgccaggaaaaaaaggagaggggtaatagaa
aaacggagaagagatagaataaacaacagtcttgctgaattacgaagactgattccagca
acagctcacaagaaaagctctcccaaaatggagaaagctgaaatcctgcaaatgacaatt
gaccacatcaaggctattcaaaacttttcaggttttcgtccttttggaagtatttccggc
tttgaaatagattatcactcattcgggttccgagaatgtttagacgaagtgcgacgattt
tttatgtacattcatggaacgaaaatatccagcattacgaatcttgtctcgcatttgcaa
gataaactaaacagagtgcaagctgcagacatgtcttcaagactatactttcgacgattg
gatgataccatttacccaagacaagtcaagacttcggcaggcctaacttccaacttacga
aaccatttcaacctcgctttaatgccgcagatttcgcaacaaatgtcatggcaaaccatg
tcaccatacacattgccatatcggattccgcaccaaagaaatgtcttaattgagtcatgg
aataaagtttgcctctga
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