Clavelina lepadiformis (light-bulb sea squirt): 143447266
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Entry
143447266 CDS
T11416
Name
(RefSeq) sodium- and chloride-dependent betaine transporter-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
143447266
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clep02000
]
143447266
Transporters [BR:
clep02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
143447266
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NCBI-GeneID:
143447266
NCBI-ProteinID:
XP_076803399
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Position
2:complement(2645781..2650746)
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AA seq
571 aa
AA seq
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MREKWTNRFDFLFVTVGSAVGLGNMWRFPYLCYRNGGGAFLIPYLVTLLVVALPQLILQV
SLGQYTSLSPVKAWEMVPAMKGIGYATIVYAVISNVSYSTVLAWTLRYLYASMSPVLPWM
TCTNSWNTLGCFVPDNNQSTSKSLYVNASGTNSTRNTSEIASSVAEFWTRGVLGLSEGLT
DIGRFQTPLVVCLTITWILIFLAMLKGANWTSKVTYVTSTLPIFILVAVLVRGVTLDGSY
EGIIHFVKPNMTKLSQPQVWKDALLQNLFSLSLGSGGMMTMGSFNSYHHNFLRDAIALSV
VNSCASFLAGFAVFSTLGFMAKQQNTTVDLVAESGPGLVFTVYPQALSMMPGSQFWSVAF
FLMLFLLGLDSLFVIIEAVSTVILDQFPAVFDKQLKKIFMRFCLCCFYFFAALITVTQGG
MYYIHLIDNFSSTSWALLFSGGCECIAISWIFGLDRFYEIMCDMLQFRPRFPWFKYCWKY
VVPLLSAGLFIYCLVLYKPLVYNRTYEYPAWSIGVGWLLSLSSFLWIPGYAAYYLIKKRC
LEQDKRKMSDAGKDQMEMEELKVSIAESSEL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagaaatggacaaaccgttttgattttcttttcgtaacggtcggctctgcagtt
ggcttgggaaatatgtggaggtttccttatctatgttaccgaaacggaggaggagctttt
ctaattccatatttggttacattacttgttgtggctctcccccagttaatactacaagtc
tctttgggccaatacacaagcttgtcacctgtgaaagcctgggagatggttccagcaatg
aaagggattggatatgccacaatcgtttacgcggtaatttctaacgtctcatattcgact
gtactggcctggacgttgcggtatttgtacgcaagcatgtctcctgtccttccatggatg
acgtgcaccaactcgtggaacacattgggctgctttgtgccagataacaaccaatctacc
agtaagagtttatacgtcaacgcatctgggactaactctactagaaacacatcggaaatt
gcatcatcggtcgctgagttttggacgagaggcgttttgggcttatctgaaggtctcact
gatattggaaggtttcaaactcctttggttgtctgcctcactatcacgtggatacttata
ttcctcgctatgctaaaaggcgccaactggactagcaaggtcacctacgtaacgtcaact
ctgccaatctttattcttgttgcggttctggttcgtggcgtcaccctggacggttcatat
gaaggaataattcactttgtaaagccaaatatgacaaaattatcccaacctcaggtgtgg
aaagatgctcttcttcagaacttgttttcactgtcgcttggctccggtggcatgatgacc
atgggaagctttaattcttaccatcataactttttgagggatgctatagccctttctgtt
gttaatagctgtgccagttttttagctggttttgctgtgttttcgacgcttggatttatg
gcaaagcagcaaaatacgacagtcgatctagtcgcggaatctggacccggtctggttttc
actgtttatccgcaagcactttccatgatgccagggtcacagttttggtcagttgctttc
tttctgatgctatttctgcttgggctagacagtttgtttgtcatcatcgaagctgtttcg
actgtaattctagaccagtttccggctgtgttcgacaaacagctgaaaaagatcttcatg
cgattttgcttgtgctgcttttatttcttcgcagctctcataacagtgacacagggtgga
atgtactacattcatctcattgacaacttttcatcaacaagttgggctcttctcttctct
ggaggttgtgagtgtattgcaatctcgtggattttcggtttagatcgtttctatgaaata
atgtgcgacatgttacagttcaggccaaggtttccgtggtttaaatactgctggaaatat
gtcgtacccttgctatcagcgggtctctttatttactgtcttgttctgtacaagccgctg
gtgtataaccgtacatacgaatacccagcgtggtcaataggagtcggttggttgttgtca
ctaagtagctttttatggatccctggatatgctgcttattatctaatcaagaaaagatgc
ttggagcaggacaagcgaaaaatgtcggatgcagggaaggatcagatggaaatggaggag
ttaaaagtttctatcgcagaatcctcggaactttag
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