Clavelina lepadiformis (light-bulb sea squirt): 143447338
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Entry
143447338 CDS
T11416
Name
(RefSeq) farnesyl pyrophosphate synthase-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00900
Terpenoid backbone biosynthesis
clep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
143447338
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
clep01006
]
143447338
Enzymes [BR:
clep01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
143447338
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
143447338
Prenyltransferases [BR:
clep01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
143447338
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
143447338
NCBI-ProteinID:
XP_076803504
LinkDB
All DBs
Position
2
Genome browser
AA seq
346 aa
AA seq
DB search
MNSTNELWSDFENHFEEIVADLSLPPSSSGISWSYQRIKEILEYNVPDGKRTRGLTVVSC
YDAISNGQSTKAGRKLALTLGWAVEILQAAFLVADDLMDQSELRRGKNCWYRKNGVGYQA
VNDCMVLESCVFTLLRKHFRSLPCYADLVDLFHTVLLRTEMGQSLDMATSEQPEVDFSSF
TEEKYSAIIQYKTAYYSFYLPIAVAFYLTGITDEECHKKSCDILVKIGSLFQIQDDYLDV
YGDPEITGKIGTDIEDNKCSWLIVKAISIASGEQLKILESCYGKKNGESVKKVKEVFGDL
NLVFEFKKYENETYQEIKLEIENFDDTRVPQSVFLSLLNKIYKRKK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaattctacaaatgaactgtggtcagattttgaaaaccactttgaagaaattgtagct
gatctttcattaccaccgtctagcagtggaatatcttggagttatcaacgaatcaaagaa
atattagaatataatgttcctgatggaaaacgtactcgtgggttgacagttgtaagttgt
tatgatgcaatatctaatggccaatccactaaagcaggaaggaaacttgccttgacactg
ggttgggcagttgaaatacttcaagctgcttttttggtagcagatgacttgatggaccag
tccgagttacgccgtggaaaaaattgctggtatcgcaagaatggggttggttatcaagcg
gttaacgattgtatggttttggaatcatgtgtattcacactgctgagaaaacacttccgc
agtttgccctgttatgctgatttggttgatctatttcacacggttcttttaaggactgaa
atgggccaaagtctggacatggccacttcagagcagcctgaagttgacttctccagtttt
acagaggagaaatattctgcgattattcagtacaagacagcttactattcattttatctg
ccaattgccgtcgcgttttacctaactggtattacggatgaggaatgccataaaaaatca
tgtgacatacttgtcaaaatcggcagcctatttcaaatacaagatgattacttagatgtc
tatggtgatccagaaatcactggcaagattggtactgacattgaagataacaaatgctca
tggttgattgtaaaagcaatttctattgcatcaggagaacaattgaaaattctggaaagt
tgttatgggaagaaaaacggggaaagtgtgaagaaagtgaaagaagtttttggggacttg
aatcttgtttttgaatttaaaaagtatgaaaatgaaacctatcaagaaattaaattggaa
attgaaaactttgatgatacacgtgtccctcaatcagtttttcttagcttacttaataaa
atctataagagaaaaaagtaa
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