Clavelina lepadiformis (light-bulb sea squirt): 143447443
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Entry
143447443 CDS
T11416
Name
(RefSeq) PMS1 protein homolog 1-like
KO
K10864
DNA mismatch repair protein PMS1
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clep03400
]
143447443
DNA repair and recombination proteins [BR:
clep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
143447443
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NCBI-GeneID:
143447443
NCBI-ProteinID:
XP_076803662
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Position
2:26202594..26207718
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AA seq
878 aa
AA seq
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MCCDLYVLCVVIFMLLVMKKLGDETARLIASGQVATSVANCVKELVENSLDADATNIEIK
LDKYGLNKIEVRDNGRGIPCSDMCYAAQQHYTSKIKTHDDLLVVATYGFRGEALSSMCKV
ADVAITTRTKDELYSTVYTLDSNGIVKSQKPSHIAQGSTVVVSNLFKNLPVRRQYFSSIK
KQKEQVKLTEDLLMSYSIALPSVQFKLFSDRMLVWQKPRLLSHRSSFLHVLGAGMQVIER
ESSSGGSHLKIFFTKNYSCRRSCDRCFVIINKRPVRDKQIDKVLRSHISKQDDKKYAGWP
VAALIIEVPSMEIDVNVNANKTEVFLTMKSNVLKMLVEMLQEDFQASKAQSESSASKESS
SSFNNDQIVDQVGDMSVDQHKNPVDSEDSRRSSDETNCEVDFQQTSGVGCHFQADGSQRN
SLFDDVESRTESNDENLDRVVVSESDKCQRSDPASTTHQSSQIEPEIVFAPNFTISSQLS
DVGESRDGTEADRCVDDDPDQWSRGHALKDVDRHDVEPVRVIRGQQTLRKDADNGNKSSR
KRPSDELSQSTLDGVVEVIQRKKPRSIFDICRDETGKSWEDLCEDDQKKVASVACQEYDK
CAGANKDCRVTMSTKKTISRNSFITIGSDDDSDDEDTGEVTKVKLSFNLKRVKKNVMIAG
LSFNNCPRVVGFLYQHQAALLCHNSLIYVINLLRLQEAIIFRNLLTSHQLPCIDLDVDLE
LNEDNLGTQELDVLRTLPVCATSHLQPDVDVVDQRLVSNGFKVKRISGGYHGYHLHSMTT
SVPYYALDDLRDILRKISLNKATTLEGSRPSKVIYYLQGEAARVVKSSPSQPDDQDVMRM
LNSLSQFESAWPEEMFSTQCFHQRNIFHKLFEIKTLDV
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgtgatctttatgttttatgtgttgtgatctttatgttgcttgtcatgaagaaa
cttggcgatgaaactgcccgtctgattgccagtggtcaagttgcgacaagtgttgcaaac
tgtgtgaaggaattggttgaaaactcacttgatgccgatgccaccaacattgaaataaaa
ttggacaaatacggcctgaacaagattgaagttcgtgacaatggtaggggaatcccctgt
agtgatatgtgttacgcagcacagcaacattacacttcaaagattaagacccatgatgac
ctgcttgtggtggcaacatatgggtttcgtggggaagcgttgagctcgatgtgcaaagtg
gctgatgtggccatcaccacccgaactaaagatgaactttacagcactgtctacacgctc
gattcaaacggcattgttaaatcacagaagccttcacatattgctcagggatcaaccgtc
gttgtctcaaacttattcaaaaaccttccagtccgaagacaatattttagttcaatcaaa
aagcaaaaagagcaagttaaattaactgaagatcttctcatgtcttattctattgcgttg
cccagtgtacaatttaagttgttcagtgacaggatgttggtctggcagaaacctcgtctt
ttgtcccaccgaagttctttccttcatgttttaggagcagggatgcaggtcattgagaga
gagtcttcatcaggtggaagtcatctcaagatcttcttcacaaagaattacagctgtcgt
aggtcatgtgatcgctgttttgtcataatcaacaaacgtccggttcgtgacaaacaaatt
gacaaagttttgagatcgcacatttcaaagcaagatgacaagaaatatgcaggttggcct
gttgcagctctgatcattgaagtgccatcaatggagatagatgtcaacgtcaatgccaat
aaaactgaggtcttcctcacaatgaagagcaacgtcttgaagatgctcgttgaaatgctg
caggaagacttccaagccagcaaggctcagtcggagagctcagcaagcaaagaatcatca
agttctttcaacaatgaccaaatagttgatcaggttggtgatatgtcagtcgatcaacac
aaaaatcctgtcgatagtgaagattcaaggcgatcttcagatgaaactaattgcgaagtg
gacttccaacaaacaagtggtgttggctgccactttcaagctgatggttctcaaagaaat
tctttattcgatgacgtcgaatctcgaactgagtcgaatgacgaaaatctggacagggtt
gttgtttcagaatcagacaaatgtcaacgttccgatcctgcttcaacaacgcatcaaagc
tcgcaaattgagcctgaaattgtgtttgcaccaaacttcacgatttcgtcccaactatcg
gatgttggtgaaagcagagatggtacagaagcagacagatgtgtcgatgatgatccggat
cagtggagtaggggccacgcgttgaaggatgttgacagacacgatgttgaaccagttcga
gtcatccgaggtcaacaaactctgaggaaggacgccgacaatggaaacaaaagttctcga
aagcgaccatcagacgagttatcacaatcaacacttgatggtgtggtggaggtaattcag
aggaagaagccaaggagcatctttgacatctgcagggatgaaaccggcaagagctgggag
gatctttgcgaagatgatcagaagaaagtggcatcagtggcatgtcaggagtacgacaaa
tgtgctggagcaaataaggattgtcgggtcacaatgagtacgaagaagacaatctcacgc
aattctttcatcacaattggaagtgatgatgactcagatgatgaagacactggagaggtt
acaaaagtgaaactttcttttaacttgaaaagagtgaagaagaatgtaatgatagcgggt
ttgtcttttaataactgccctcgtgttgttgggtttctttaccagcaccaagctgctttg
ttgtgtcataattcactgatatatgtcataaacctgttgcggttacaagaagctataatt
tttcgaaacctcctgacaagccaccaacttccatgcatcgacctcgatgtcgacttggag
ctcaacgaagataatctcggcacgcaagagctcgatgttcttagaactttgccggtttgt
gcgaccagtcatctgcaacctgacgtggacgtcgttgatcagcgacttgtgagcaacggc
ttcaaagtaaaacgcatcagcggcggttaccatggttaccacctccactcgatgaccaca
agcgtgccttattatgccctcgacgatttaagagatattctacggaaaatttcacttaat
aaagctacaaccttggaagggtcaaggccatcaaaggtcatctattaccttcagggggag
gcagccagggtggtcaaatcaagtccatctcaacctgacgatcaagatgtgatgaggatg
ttgaattcactctctcaatttgagtcagcgtggccagaagagatgttttctacgcagtgc
tttcatcaaagaaatatctttcataaactttttgaaatcaaaacgttggatgtttaa
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