Clavelina lepadiformis (light-bulb sea squirt): 143447500
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Entry
143447500 CDS
T11416
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143447500
04121 Ubiquitin system [BR:
clep04121
]
143447500
Enzymes [BR:
clep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
143447500
Membrane trafficking [BR:
clep04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
143447500
Ubiquitin system [BR:
clep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
143447500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_Vps41
HypA
DUF8122
zf-ANAPC11
Prok-RING_1
DUF7129
DUF1272
Motif
Other DBs
NCBI-GeneID:
143447500
NCBI-ProteinID:
XP_076803758
LinkDB
All DBs
Position
2
Genome browser
AA seq
313 aa
AA seq
DB search
MFVQNMASTSLLYYCHSCDRRISPITDDFICPNCRGGFVEFVEDEEDISEEEPSEVTRDT
QNGSSRDQTPQSEAQSSMANPFSILQLFQGLDSRNQLPNFVVRNSRSNDEAGSSSAPYDL
RSRNRPSSGSSRGPNSRGEDMLIADVMQRVLGGFDPTFFHISLGGGGPGSLNFMQLHGNS
GDYAWGPNGLDNVISQLLGQLENAGPPPASKQAIENLPTQEITQKDVDVKKECSVCMDPF
KLSDTVKKLPCEHFFHIPCIDPWLELHNTCPICRKYVDEESCSGQSSSSSSNGAGSSNNS
FSFFSTGPDVNRS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtccaaaacatggccagtacatctttgctttattattgccatagttgtgaccga
aggatatctcccattacagacgattttatatgcccaaactgcaggggtggcttcgtggag
tttgtggaggacgaagaagatatctcagaagaagaacctagtgaagtcacacgggacaca
cagaatggaagcagcagggatcagactcctcaatcagaagctcaatcctcaatggccaat
ccatttagcatattgcagttattccaaggattagactccagaaaccaacttccaaacttt
gtcgttcggaattccagatcaaatgatgaagcaggctcgtcaagtgctccttacgatctc
aggtcacgtaatcgcccatcctcaggatcatctagagggcctaatagtaggggtgaggat
atgttaatagcagatgtaatgcaacgtgtactgggtggatttgacccaacattctttcat
atttctttgggaggtggaggcccaggatcattgaattttatgcaacttcatggcaactct
ggtgactatgcatggggaccaaatggtttggataacgtcatttcgcaattgctcgggcaa
ctggagaatgcaggtccaccgccagcaagcaaacaagccattgaaaaccttccgactcag
gaaataactcaaaaagatgtcgacgtgaaaaaagaatgttcggtttgcatggatccgttt
aaactttctgatacggtaaagaaactaccttgtgagcatttctttcacataccgtgcata
gatccttggctggagctgcacaacacatgcccgatatgtcgcaaatatgttgatgaagag
agttgctcaggtcaatcgtcatccagctcatcaaacggggcgggaagttcaaacaattct
ttttcttttttctcaactggtcctgacgtaaatcgctcctaa
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