Clavelina lepadiformis (light-bulb sea squirt): 143448398
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Entry
143448398 CDS
T11416
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
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Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-B_box_Trim66
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
143448398
NCBI-ProteinID:
XP_076804243
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Position
1
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AA seq
1303 aa
AA seq
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MDQTPEKITLEVTSNEPSEMHRQKRALSTDGTVAPQAKISKNAVDDITVSSERMPDNCEN
AIDKTEVQTNSFTKEVFTDSTDGADVTISESRSISKKVAEDGNVKEVGPRKIEDGAEVSI
LSSAPSLDLNTATETKKRDIQKTVLLLPENYFNSCMMCKRSLKGNNPLLLGCLHSFCSKC
ILKRKYFRISNSITLAMKAQQDRQLAQKGDACLLSPEIPEDLGLSSLPESAFQSLTTLKH
FIAENNDTLGKMVVKCQICECNTRAKVIARNYFSSFQAKTEEVPATTETSADEKFCTSCE
EKSLAVRFCQECDDYLCEDCLTAHKRVKLTKDHTLQLITGVTINEKSEETTLKQYCRKHV
KEQIKLFCETCSVLTCRDCQLEFHRDHKYLFVQEAANNQTKILETMRQKLKEKKFFLDQT
STTIEDRLQTMYKCRDKANNDIILFHRQLQQQVTQKCQFFLNKIHEVTSLRESKLSTQLH
ATGKLSAAVDHCIKFIKFASEQQNHLPLLDAKQMVLEYMTTVMRQKFTTNPVTSSDIIFL
PDKDIIKLVSYKLGSLLWGNPATSMKQSSASQMPNKNMSHQARMSAKPKARSSPSTLQYR
PQQQVGSMRPMHQTGPAMPISSNQIRFSHSRQMSLPRQQYQHNMFVNRPTQENIDRNGPQ
STTSVYLLDMQKLVNVPPTEQQNSQTGSHPYQPKHIQSTVNNASAVYQVNNTTTPHVSTQ
LYRSGHATSRNNNVSGEIHPQQQHVIPSVNQQCPPKQQPSLTLTIQQMQHSQQTPPSTMQ
ISNDILETERSPVANPSGFIELKPFVQRPLSQININVPDDANVTSPSRVKALRCLPQDQH
LSASSQLGNDFPVIISKQPSTSPQNQSSSFLGEVAVISQQQMLPILTGEIEPMTPESKGD
IASKTSTESGVVLDQAASISSCDSAFGNTSKTDCPVNESTGKREPTLSPPPLIDLTDIVK
IEEEQDLSMQVKSDNEFEEMLSSLVNQDSNKLQEESPETADLKDAPMLDSNTDEVERKFD
PNEDWCAVCNNGGDLLCCDTCPKVFHFHCHVPEILSSPPGLWQCMLCRDIDKLLEVESKY
PKRKRTTGLMGKELKLCEKLLLEIFCHRQSMIFHLPVRSSVPNYHKVIKEPMDLSKIKKK
LLSSNFNHYESESEFLQDIQLMFTNCFRFNGENSQYGLLARELQLYWIERVKERLPLHID
FVDQLMKEQRLFLDKNSSNQLSQGVEPNAILDEKETPPSEKAKYVPYENDTLWKPNMEEL
DEDSSCGTPGLLVQNDLMDEGQLTRPHSEKRRKQSKSGIVHIK
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacaccagaaaagataacacttgaagttacatcaaatgaacccagtgaaatg
caccgccaaaaacgtgcattgtcaacagatggaactgttgctccgcaagcaaaaattagc
aaaaatgctgttgatgacatcacagtatcttctgagaggatgccggataattgtgaaaat
gcaatagacaaaacagaggtccaaactaactcttttaccaaagaagtatttacagattct
accgatggtgccgatgttaccatctcggaaagtaggtcaataagtaaaaaggttgcagaa
gatggtaatgtaaaagaagtaggccctagaaaaatagaagatggtgcagaagtgtcgatt
ttgtcttctgctccaagtttagacttgaacacagctacagagacaaaaaagcgagatata
cagaaaacggtcttgctccttccagaaaattattttaactcctgtatgatgtgtaaacgc
tcactcaaaggcaataatccattgctccttggctgcttacacagtttctgttcaaagtgc
atcctgaaacgaaaatattttcgcattagcaactcaatcacattggcaatgaaagcacag
caggaccgccaattagctcaaaaaggagatgcatgtttattatctcctgaaattccagaa
gaccttggactaagttcactacctgagagtgcatttcaaagcttgacaaccttgaaacac
tttattgctgaaaataatgacacactaggaaaaatggttgtcaaatgtcaaatttgtgag
tgcaatactcgtgccaaggtaattgcaagaaattatttctcatcttttcaagcaaaaaca
gaagaagttcctgcaacaactgaaacaagtgccgatgaaaagttttgcaccagttgcgag
gaaaagtcacttgctgttcgattttgtcaagaatgtgatgactatttgtgtgaagattgt
cttactgcccacaaaagggtaaaactcaccaaagatcatactttgcagttaataacagga
gtcaccattaatgaaaaaagtgaagaaactactcttaagcaatactgcagaaagcatgtt
aaagagcaaattaagctgttttgtgaaacatgcagtgtacttacttgtagagattgccag
ttggaattccatagagaccacaagtatttatttgttcaagaagcagctaacaatcaaacc
aagattcttgagaccatgcgacaaaagcttaaggagaagaaattttttcttgaccagact
tcaacaactattgaagatagattgcaaaccatgtacaaatgcagagacaaggccaataat
gacatcatactctttcatagacaacttcagcaacaagtcacacaaaagtgtcaatttttt
ttgaacaagatacatgaagtgacaagcctaagagaaagcaaactgagcacacaactacat
gcaacaggaaaattaagtgcagctgttgatcactgcatcaagttcattaagtttgcaagt
gagcagcaaaatcatcttcctttattagatgcaaaacaaatggtgttagaatacatgaca
acagtcatgcgacagaaatttaccacaaatccggttacatcaagtgacattatctttctt
cctgacaaagatatcataaagttggtttcatataaacttggttctcttctgtggggcaat
cctgccacaagtatgaaacaatcttctgcatcacaaatgcccaataaaaatatgtctcac
caagctagaatgtctgcaaaacccaaggcaaggagttcaccctccacactacaatatcgt
cctcagcagcaagttggttcaatgaggccaatgcatcaaactggacctgccatgccaata
tcgtctaatcagattagattttcacattctagacagatgtcattaccacgtcaacagtat
cagcacaacatgtttgtcaacaggccaacacaagaaaacattgacagaaatggtcctcaa
tccactacctctgtatatctactggacatgcagaaactcgtaaacgttccccctacagag
cagcaaaattcccaaaccggtagtcatccttatcaaccaaaacatattcaatcaactgtt
aataacgcaagtgctgtatatcaagttaacaataccacaactcctcatgtttccacacaa
ctttacaggtcaggacatgctaccagccgcaacaacaatgtcagtggggaaatacatcca
caacagcaacatgttatcccaagcgttaatcaacaatgtccacctaaacagcaaccatca
ctaactctgacaattcaacagatgcaacattctcagcaaacaccaccatcgaccatgcaa
atatctaatgatatactggaaacagaaagatcacctgtagcaaatccctcaggatttatt
gagcttaagccatttgttcaacgtccactatcgcagataaatataaacgtacctgatgat
gcaaatgtaacttcaccaagcagggtaaaagccttaagatgtttgccccaagatcaacat
ttaagcgcttcttcgcagctggggaacgattttccagtgattataagtaaacaaccatca
acgtcgccacagaatcaatcctcttcatttctcggtgaagtagccgtaatttcccaacaa
caaatgttgcctatcctaactggtgaaattgagcccatgacaccagaaagcaaaggagac
atagccagcaaaacgtcaacagaaagtggtgttgttcttgatcaggcagctagcatttca
agttgtgatagtgcgtttggtaacaccagcaaaacagactgtccggtcaatgaatctact
gggaagcgggaaccaaccctttcacctcctccactgattgatctcacagacatcgtaaag
attgaagaagaacaagatttgagcatgcaggttaaaagcgataatgaatttgaagagatg
ctctcatcattggttaatcaagatagcaataaattgcaggaagaatcacctgaaacagca
gatttgaaagatgcaccaatgcttgattctaacactgacgaagttgagagaaagtttgat
cccaatgaagactggtgtgctgtttgtaataatggaggtgacctactctgttgtgacact
tgtccaaaggtttttcattttcactgccacgttcctgaaatcctgtcatctccaccgggc
ctgtggcagtgcatgttatgtcgggatattgacaagctgcttgaagttgaatcgaaatat
ccaaaaagaaaaaggacaacaggcctaatgggaaaagagttgaaactctgtgaaaaatta
ctattagaaatcttctgccatcgacagagtatgatatttcaccttcctgtgcgttcatcg
gtaccaaactatcataaagtcatcaaagaaccaatggatttatcaaaaataaagaaaaag
ttgctcagcagtaattttaatcactatgaaagcgaatcagaatttctacaggacatacaa
ctcatgttcacaaactgtttccgctttaatggagaaaactcgcaatatggacttttggcc
cgagaactccagctttattggatagagcgtgttaaagaaagactgcccttgcatattgat
ttcgtagatcaattaatgaaggaacaaagactttttttagataaaaatagctcaaaccaa
ctaagtcaaggagtagaacccaacgcaatcttagatgagaaggaaacgccaccttccgaa
aaggcgaagtacgttccttatgaaaatgacacattatggaaacctaatatggaagaactg
gacgaagattcctcttgtggaactcctggtcttctggtgcagaatgacctgatggatgaa
ggtcagctaacacgaccacactcagaaaagcggcgcaagcaatctaaaagtggtattgtc
catatcaaatga
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