Clavelina lepadiformis (light-bulb sea squirt): 143448696
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Entry
143448696 CDS
T11416
Name
(RefSeq) E3 ubiquitin-protein ligase RNF103-like
KO
K15695
E3 ubiquitin-protein ligase RNF103 [EC:
2.3.2.27
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clep04121
]
143448696
Enzymes [BR:
clep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
143448696
Ubiquitin system [BR:
clep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
143448696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-C3HC4_2
zf-RING_5
RNF34L-like_3rd
Motif
Other DBs
NCBI-GeneID:
143448696
NCBI-ProteinID:
XP_076804658
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All DBs
Position
3:7876031..7880584
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AA seq
643 aa
AA seq
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MIFLKFILLLVYLVALLAVYRIVDYIACSEAAGVATLVDPLALTLQELRWILHARGITYH
HAIEKKDLRELVQATGIVSNEEVSAAKDMDSDSSTKTVYFTNAEDFDEAIDKSEDVWLVQ
IVAESSEPIMQDSEWKKLKKRAFAAGIHTGKITCKDNRICHSRSFFSPQLLLSYHYQKDS
KGIHQKYYITKPADCNHVFHWISNALQSTVEEVPNLLSLKRSWLSTHTKRSYPVQIVYVS
RLSQVPVNFAVLKIKFKDSVRFGKMITTNDMKDLQTFTNHDSLPESFMYVITSEGLSVYG
DSKLKGNLMHFNDLHLFVRFLNFDINLLFTWSIYICNLLATLSFFTGNSNLLTRLVAFVK
SFVTYNAVVLCVWLFLSSYNVKSFSPFTNYLLANIRAMVTTDYAGILRTDLIKLLQAPYL
VAAGFVLFYTLALFVMRKLGIVDNEPEAETLADILLLNNNHSPSDNDISQRWVERLATPG
LWLQPLVPCDYIEDLPVWGYSGKCILNSDDSEGDEHAICTGRRASPSPSRLWPRSCSPVP
RGRPCFMETTRQSSLRLRRGILRSLKSCFRGRSPKVKQTPGPPSGMREESCCSICLENYT
QQSLVCGLPCHHVFHHECILSWLHGDRHCCPICRWPSYQAKYS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatatttctgaaatttattcttttgcttgtctacttggttgcccttcttgcagtatat
cgaatagtggattacattgcatgctcagaagctgctggggtggccacattagttgatcca
cttgccttaactttgcaagaattaagatggatattacatgctagaggaattacctaccac
catgccatagaaaagaaagatcttagagaattggtgcaagctactggaattgtcagcaat
gaagaagtgagcgctgcaaaagacatggattctgattcgtcaaccaaaactgtgtatttt
accaatgctgaggactttgatgaagctattgacaagtcggaagatgtttggcttgtccag
attgtagctgaaagtagtgaacctataatgcaagactcagaatggaaaaagttgaaaaaa
cgagcttttgctgcaggaatccatactggcaagatcacatgcaaggacaacagaatttgt
catagcaggtcattcttttcaccgcagctgttgttaagctatcattatcagaaagatagc
aaagggattcatcaaaaatattatataacaaagccagctgactgtaatcatgtttttcat
tggatttctaatgcactgcaaagtactgtagaagaagtgcccaatttgctgtcgcttaaa
aggagctggctaagtacacacacaaaaagatcctaccctgtccaaatagtttatgtgtct
cgcttgtcccaagttccagtgaattttgcagtgctcaaaataaaatttaaagatagcgtt
cgttttggcaagatgataacgacaaatgacatgaaagatttacagacctttacaaatcat
gattcactgccggaaagttttatgtatgtgattacttcagaaggactatcagtatatggg
gacagcaagttgaaaggaaatttaatgcattttaacgatttgcacttgtttgtaagattt
ctaaactttgatattaacctgctctttacctggagcatttatatttgcaatcttctggcc
acactaagcttttttactggtaatagtaatctcttgacaagacttgtagcttttgtgaag
tcatttgttacatataatgctgttgtgctatgtgtctggttgttcctatctagttacaat
gtgaaatcattcagtccttttaccaattacttgctggcaaatattcgtgcaatggtaacc
actgattatgccgggatattgcgaaccgatctaatcaaattgcttcaggccccatattta
gttgctgcaggttttgtacttttctatactcttgctctttttgtaatgcgcaaattaggg
attgtcgacaatgagcctgaagctgaaacgcttgctgatattctcttgctgaacaataac
cattctccaagtgacaatgatatttcccaacgctgggtagaacgtcttgcaactccaggt
ttgtggctgcaacctcttgtcccttgcgactacatagaagacttacctgtttggggatat
tctggaaaatgtattcttaactctgatgactcggaaggtgacgagcatgcaatctgcact
ggaagaagagcttcaccatcaccaagtcgactttggccaagatcttgcagccccgtacca
agaggaagaccttgttttatggaaaccacgcgtcagagttcacttaggctcaggagagga
attttgcgctcacttaaatcatgctttcgtggtcgcagcccaaaagtcaagcagacacct
ggaccaccctcaggtatgcgtgaagaatcttgctgttcaatttgcttggaaaattacact
caacagtctttagtttgtggccttccctgtcatcatgtttttcatcacgaatgcatactt
tcttggttgcatggagatcgtcattgttgtcctatctgcaggtggccatcatatcaagct
aaatacagctaa
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