Clavelina lepadiformis (light-bulb sea squirt): 143448739
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Entry
143448739 CDS
T11416
Name
(RefSeq) transcription factor HES-1-B-like
KO
K06054
hairy and enhancer of split 1
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03460
Fanconi anemia pathway
clep04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
143448739
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
143448739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clep03000
]
143448739
03400 DNA repair and recombination proteins [BR:
clep03400
]
143448739
Transcription factors [BR:
clep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
143448739
DNA repair and recombination proteins [BR:
clep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
143448739
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
YbyB
Motif
Other DBs
NCBI-GeneID:
143448739
NCBI-ProteinID:
XP_076804711
LinkDB
All DBs
Position
1
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AA seq
260 aa
AA seq
DB search
MKDLLFAVFVQTTSKLLKDKSRRKRIKNSLNELISILLNILGIQLFLQQRQRHSKLEKAD
ILEMTVRYLKEFQGQTLNAAKAIDPRVTSKYRSGFVECKNEVSHTLENTNAGIQPDVKTR
LMNHLGSNVPPPLIPSSSSLLIPFPTHFSLSPSATPQRSGCGSVNKHNVQGNFTLISLST
SSTVPPRIHGNRTAHVSTETEQRKSASLPKKSYTICCVSPTSPASSLVPRVQDILMMSSS
MLRSCSAVSDSDSEPVWRPW
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgctatttgccgtctttgtgcaaacaacttcaaaactgcttaaggataaa
agccgacgcaagaggattaaaaacagtctgaatgaactgataagtattctcctcaacatt
ttaggaatacagttgtttcttcagcaaagacaaaggcattcaaaattggaaaaggctgat
attctagaaatgactgttcgctatttgaaagaatttcagggacagacattgaacgcagcg
aaggcgattgatccaagagtcacgagtaaatacagaagcggatttgtggaatgtaaaaac
gaggtttctcacactcttgagaacacaaacgcaggaattcagcccgacgttaaaacgagg
cttatgaaccacctcggaagcaatgtaccgccgccactcattccctcctcgtcttcctta
ctcattccattcccaactcatttctccttgtctccttccgcgactccacaaaggtccgga
tgcgggagtgtaaataagcacaacgtccaaggaaactttaccctcatctcgctatcaacg
tcgtccaccgtacccccacgtatccacggaaacagaacagcccacgtatccacggaaaca
gaacaacgcaaatccgcatcgctgcccaaaaagtcctacacgatatgttgcgtgtccccg
accagcccagcttcatctcttgtcccaagagtccaggatattttgatgatgtcatcatca
atgttgcgttcttgttcagcggttagcgacagcgactcggaaccggtgtggaggccttgg
taa
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integrated database retrieval system
