Clavelina lepadiformis (light-bulb sea squirt): 143449454
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Entry
143449454 CDS
T11416
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
143449454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143449454
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clep04147
]
143449454
Membrane trafficking [BR:
clep04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
143449454
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
143449454
Exosome [BR:
clep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
143449454
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_5
Ank_4
PH_11
Ank_3
Vps5
PH_21
PH_alsin
BAR
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
143449454
NCBI-ProteinID:
XP_076805779
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All DBs
Position
3:22052137..22063226
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AA seq
903 aa
AA seq
DB search
MNVLLDFEECIKDSPFFRDTVHQSEVEITQLESHLEKITKTCSTMVDSGKTYNNVSRVFV
SSLKDVAAQSQHDPFVQGALSRFANVMVELADYHTILFDQAQRSIKTQLTTFLKGEVKNV
RELKKAFDKVSEDYSNSLSKHAAVNRLKPHEIDHASTHLAATRSCFRSVASDYVFQINML
QKNSKFQAVDKMLSYMHALNTFFHQGYDLMKELEPFMKSISEQLEELNRQTYADQKSMLV
EQERHQSMTGDSGIYMRCVDDTLVIEGHLFKRASNALKTWNRRWFTIRDNKLFYQKKKDD
LTVVVDDIRLCTVRSFDEIERRFCFEIILPGKSFLLQAESEGAKTAWINAIQTSIGAAFK
DTVQDACPVPPSSLPINKALVNVNTPLSRTPSNSSTNSLSEIGSKKTEARSDIPNPTSFL
EDGDGSVIAKLYQVTGNKVCADCGKADPRWASISLGITLCIDCSGVHRSLGVHISKVRSL
TLDDWEPEVLKIMLSLGNERVNEIYTANLSSADAIKPNCSNKDRNVFIRAKYAECKFAMT
LPSALDLQHGPSGQKLTRWTVSRRRRIKKSPNVKSSESTQSPMGQRRDFTAITSDSPGRR
SAETRNKNGRKSLFLDDELNSLFSYFENRQLEGKETDDVIVFGQSTRTESSKDFEDSDIY
DISKLHPDLLLFKATEASNLPVMLLAKCNGANLNWQNDEDEGKTPLMQAACVGSIQTSEY
LLVNGAKINEKDWNHRTALHYAALHNHTGIACQLLKRNMDLDVQDSSDKTALDIAVDGTK
ADIVTLIRLKKMNDQMKEDDSSTYQTDALYHDVFRDFTQRASSALHSPEVQDAAKTFNIL
GANLISQNKAVNKTSADEIAQDAKQDNNQTVAGPAACKPNMDGIILIDSNPNGTDFDPVE
SSV
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcttcttgattttgaagaatgcatcaaagattctccgttctttcgagataca
gttcatcagtcagaagttgaaataacacaattagaaagccatcttgaaaagataacgaaa
acatgttcgactatggtggattcaggaaaaacttacaacaatgtcagtcgtgtatttgtg
tcaagtttgaaagatgttgcagctcagtcacaacacgacccatttgttcagggtgcactt
agccggtttgcaaatgttatggtggaattggcagattaccatacgatattgttcgatcaa
gctcagagatcaatcaaaacgcaattaaccaccttcttaaaaggagaggtgaaaaatgtt
cgagagttaaaaaaagcattcgataaagtgtcagaagattattccaactcactgtcgaaa
catgcagctgtcaatcgactcaaacctcatgaaattgatcacgcatcaactcacttggca
gcaaccagaagttgttttcgaagtgttgcctccgattatgtatttcagatcaacatgcta
cagaagaatagcaaattccaagctgttgataagatgctttcttacatgcatgcactcaac
acgttcttccatcaagggtatgatttgatgaaagagcttgaaccgttcatgaagagcatt
tctgaacagctagaagaattaaaccgtcagacgtacgcagatcagaaatcgatgctggtt
gagcaagagcgccaccaatccatgactggtgatagtggaatatacatgagatgtgtggat
gatactctggtcatcgaggggcatttgtttaaaagagcaagcaatgctttgaaaacttgg
aaccggcgctggtttaccattagagataacaaactcttctatcaaaagaaaaaggatgac
ctgacagtggttgtggatgacattcgcctctgcacggttcgttcctttgatgaaatcgaa
cgccgcttctgctttgaaatcatcttaccgggcaaaagctttttgcttcaagctgaatca
gagggtgcaaaaactgcttggatcaacgcaatacaaaccagtattggtgcggcttttaaa
gacacggtccaagatgcatgtccggtgccaccgagctctcttccaattaataaagccctc
gtcaatgtgaacacacctctgtctcgtactccttcaaattcatcgacaaacagtttgagt
gaaatcgggtcgaagaaaactgaagcaagatccgacattcctaatccaacatctttcctc
gaggacggagatggaagcgttattgctaaattgtaccaagtgacagggaataaagtctgt
gccgactgcggcaaagcagacccacgctgggccagcatcagccttggaattacactttgc
attgactgcagtggagtgcatcgcagtctcggagttcatatttcaaaagttcgatcgttg
accctggacgattgggaaccagaagttttaaagattatgctcagtttgggaaatgaacga
gttaacgagatctacacagcgaatctttcatctgccgacgcaatcaagcctaactgttca
aacaaagacagaaatgtcttcatcagagcaaaatacgccgagtgcaagtttgcgatgacg
ttgccttctgctcttgacctacagcatggaccaagtggacagaagttgacacgatggaca
gtcagtcgacggagaagaataaaaaaatcaccaaatgtgaaatcgtctgaatccactcag
tcacccatgggtcaaagaagagattttacagcaattacatcagattcccctggcagaaga
tcagcggaaactagaaacaaaaatggtcgaaagtccctctttcttgacgacgaactaaac
tcacttttctcgtactttgaaaaccgacagcttgaaggtaaagaaactgatgatgtcatt
gtgtttggacaatcgactcggactgagagtagcaaggattttgaagacagtgacatttat
gacatcagcaaacttcatcccgatctgctgctgttcaaagcaacagaagcgtcaaacctc
cctgtcatgctacttgccaaatgtaatggcgccaacttaaactggcagaatgacgaagat
gaaggaaaaactcctcttatgcaagctgcctgtgttggatcaatacagacttctgagtat
ctgcttgtcaatggagccaaaatcaacgaaaaagattggaaccacaggactgcactgcac
tatgccgctttgcacaaccacacaggaattgcctgccagttgttgaaacgtaacatggat
ttggatgtacaggattcctctgataaaacagcattggatattgctgttgatgggaccaaa
gcagacattgtaactttaattcgtttgaagaaaatgaatgatcaaatgaaggaagatgat
tcatcaacttaccaaaccgacgctctttaccatgacgtatttcgtgacttcactcaacgc
gcctcgtccgctcttcattcgccggaggtgcaggacgccgcaaaaacattcaacatcctc
ggagcgaatttaatttcgcaaaacaaggctgtgaataaaacttctgcggatgaaatcgcg
caggatgcaaaacaggacaataaccaaacggtcgcgggtccggcagcttgcaaaccgaac
atggacggaatcattttgatcgattcgaatccgaacggaacagacttcgaccctgttgag
tcttcagtgtga
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