Clavelina lepadiformis (light-bulb sea squirt): 143449514
Help
Entry
143449514 CDS
T11416
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04136
Autophagy - other
clep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
143449514
04136 Autophagy - other
143449514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143449514
04121 Ubiquitin system [BR:
clep04121
]
143449514
03029 Mitochondrial biogenesis [BR:
clep03029
]
143449514
Membrane trafficking [BR:
clep04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
143449514
Ubiquitin system [BR:
clep04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
143449514
Mitochondrial biogenesis [BR:
clep03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
143449514
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autophagy_act_C
Neuromodulin_N
Motif
Other DBs
NCBI-GeneID:
143449514
NCBI-ProteinID:
XP_076805863
LinkDB
All DBs
Position
3:21712197..21717314
Genome browser
AA seq
310 aa
AA seq
DB search
MMQNVFNSVKSSALNVAEKFTAVLKESKFKETGVLTPEEFVIAGDFLVHHCPTWQWLPGD
PSKTKDYLPTDKQYLLTRHVPCHRRCKQMEYNDEQEAIIDGEWVDTHHNVDFEKMQGEIK
DMTLSKESEQSFQTKEDIEDIDGEDDDDEEALDMDDFAEMLDSKDNATLDLLTVKKVNAA
SLPKDDEGNILQTRTYDLHITYDKYYQTPRLWLSGYNEDRKPLSMTEMYEDISQDHVNKT
VTIEPHPHLPPPNMCSVHPCRHADVMKKIMQTVEDGGGELHVDMYLLVFLKFVQAVIPTI
EYDYTRHFSL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgttttcaattcggttaagagcagtgcattaaacgttgctgaaaaattc
accgctgtgttaaaggagtccaaatttaaggaaactggtgttttaactcctgaggaattt
gttattgctggagattttcttgtgcatcattgtccaacatggcaatggcttccaggggat
ccttctaaaactaaagactatcttcctactgataaacaatatcttcttacaaggcatgtt
ccctgtcacagacgttgcaagcaaatggagtataatgatgaacaggaagctatcattgac
ggagaatgggttgatactcatcataatgttgactttgagaagatgcagggtgaaataaaa
gacatgacactcagtaaagagtctgagcaatctttccaaaccaaggaagatattgaagat
atagatggtgaagatgatgatgatgaagaagctttagatatggatgactttgcagagatg
cttgattctaaagacaatgctaccctagatcttctcactgtaaaaaaagtgaatgctgca
tcattgccaaaagatgatgaaggaaatattcttcaaacacggacatatgatctccatatt
acttacgacaaatattatcagaccccacgcttatggctgtctggatataatgaggataga
aagccgctttcaatgactgaaatgtatgaagatatcagtcaggatcatgtcaataaaact
gtaacgattgaaccccatccccacctacccccaccaaacatgtgttctgtgcatccttgc
cgccatgctgatgtaatgaaaaaaataatgcaaactgtagaggatggcggtggagaactg
catgtggacatgtacctattggtcttcttaaagtttgttcaggcagtcattccaacaatt
gagtacgactatacccggcatttttccttgtaa
DBGET
integrated database retrieval system
