KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143449906
Entry
143449906         CDS       T11416                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03013  Nucleocytoplasmic transport
clep03015  mRNA surveillance pathway
clep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    143449906
  09122 Translation
   03013 Nucleocytoplasmic transport
    143449906
   03015 mRNA surveillance pathway
    143449906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clep03019]
    143449906
   03041 Spliceosome [BR:clep03041]
    143449906
Messenger RNA biogenesis [BR:clep03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     143449906
Spliceosome [BR:clep03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    143449906
SSDB
Motif
Pfam: RRM_1 RRM_5
Other DBs
NCBI-GeneID: 143449906
NCBI-ProteinID: XP_076806359
LinkDB
Position
3:16503376..16506871
AA seq 187 aa
MSVDINQNAYLRPILKDPGVELTAYRDQHFKGDRVHQEKLLQLSTTLYVGNLSYFTTEEQ
IYELFSKCGDLKRVVMGLDKFKKTPCGFCFVEYYDRVSAEDCVRFINGTRLDDRVVRTDW
DAGFKEGRQYGRGKAGGQVRDEYRQDFDPGRGGFGVRAQLKTDKQTSGPGAETRERERQG
NLAAKPE
NT seq 564 nt   +upstreamnt  +downstreamnt
atgtctgttgatatcaatcaaaatgcatatttacgtcctatacttaaagatccaggtgtg
gaactaacagcttaccgggatcaacattttaagggagatcgtgttcatcaagagaaactg
cttcaattgtctaccacactttatgttggaaacctttcatattttacaacagaagaacag
atttatgaacttttctcaaaatgtggtgacttaaaaagagtagttatgggattggacaaa
tttaaaaagacgccatgtggattttgctttgttgaatactatgaccgtgtttcagctgaa
gattgtgtgagatttattaatggaacgcgtttggatgatcgtgttgtgcgcacagattgg
gatgctgggtttaaggaaggtcgacaatatggaagaggaaaagctggaggacaagtgaga
gatgagtatcgtcaggattttgacccaggcagaggtggatttggtgttcgcgcacagctt
aaaacggacaaacaaacatccggtcctggtgcagaaaccagggaacgtgaaaggcaagga
aatcttgcagccaagcccgagtaa

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