Clavelina lepadiformis (light-bulb sea squirt): 143449922
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Entry
143449922 CDS
T11416
Name
(RefSeq) vertebrate ancient opsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
clep04030
]
143449922
G protein-coupled receptors [BR:
clep04030
]
Rhodopsin family
Vision
Opsin
143449922
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srsx
V1R
Motif
Other DBs
NCBI-GeneID:
143449922
NCBI-ProteinID:
XP_076806374
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Position
3:complement(18468985..18472644)
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AA seq
385 aa
AA seq
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MQSMLGAGRIGIVNDSVIDIDYWTYDADVSLSSTAAVPEIPQCKDLNPYVLKGDGWIPQH
IEISNRTVYTCLAIYMTFLFLFSTSFNGIVIAATYKFRVLRQPLNYIIVNLAVADFLGGG
VGGFLSILTNASGYFFLGKGLCYAEGYAVSLFGCAGLNSIAVMAFERYFVICKPFGPVKV
GAKAAAAGIFVAWAWSFFWNTPPLILWDGYEPEGLGTTCAPSWFVTEDSQRLFIILYFVF
AFLFPYAIIAVCYGKLILELRQIAKESSLSGSKSPEKEVTKMVIIMVAAFVLCWLPYASF
AMYNAVNPTAQMSYGLGAIPAFFAKSATIYNPIIYVKLNRQFRDCVIRMFFSGRNPWSDE
GATSSMASVNSSQVTTVSTNKVGPA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcatgcttggtgcaggacgaatcggaattgtgaatgattcagttatagacatc
gattattggacgtacgatgcggatgtttcgctttcttcaactgccgcagtaccagaaata
ccccagtgtaaagacctgaatccttacgtgctaaaaggagatggttggattccacaacac
atcgaaatttctaacagaactgtttatacatgtctcgccatttacatgacctttctcttc
cttttctccacttcatttaacggcattgtaatcgctgcgacttataagtttcgagtgctg
agacagccgcttaactacattatcgtaaaccttgccgttgctgattttctgggtggaggt
gtcgggggttttttgtcaatacttactaatgcgtcgggttacttcttcttaggaaagggg
ttgtgctatgcggaaggatacgccgtgtccctcttcggttgcgctggattgaattcgata
gctgttatggctttcgagcgttatttcgtgatttgtaaaccattcggaccggtcaaagtg
ggagcaaaagcggctgcggcaggcatttttgttgcctgggcgtggtctttcttttggaat
acgccacccttgatattgtgggatggttacgagccagaaggtttgggaacgacttgtgca
cccagctggtttgtaacagaggacagccaacgactgttcattatcctctattttgttttt
gcctttttgtttccctatgctattatcgcagtttgttacggaaagctgattttagaatta
cgccagatcgccaaagaaagttcgctttcaggaagcaaaagcccagaaaaggaagtgacg
aagatggttattatcatggtagcagcctttgttttatgttggcttccgtatgcttccttt
gcaatgtacaacgccgttaatcctacggcccagatgagttacggtcttggtgcaattccg
gcattttttgcgaaatcagcaaccatatataatccaataatctacgttaaacttaatcgt
caatttcgcgattgcgtcatccgaatgtttttctccggacgaaacccatggagcgatgaa
ggggcgaccagcagtatggcgagtgtaaactcatcacaagtgacaactgtaagcaccaac
aaagttgggccagcttaa
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