Clavelina lepadiformis (light-bulb sea squirt): 143450116
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Entry
143450116 CDS
T11416
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05041
solute carrier family 6 (neurotransmitter transporter, creatine) member 8
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clep02000
]
143450116
Transporters [BR:
clep02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
143450116
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
143450116
NCBI-ProteinID:
XP_076806646
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Position
3:20173281..20184845
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AA seq
699 aa
AA seq
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MFCHKPSSHCHLVLFCLYVISCIGGRFSKQDNYCNFSNTKTNFVGSMNADKKDVCEIEIR
PLAGPKKDVSEPVSTSKRQTWDNKREFVLAMIGYSVGYGNVWRFPYLCYKNGGGAFLLPY
ILFVIIGGIPMFFLEVSLGQFTQMSAVEIWRLVPSMKGIGYGCTFVNLIFCFYYVLVMAW
SMLYLIHSCLPGPLPWTTCDNWWNSGICVANSNTSATNDSAPNITSFNSTSPETEFWRNY
VIRQSSGIDEIGSLENWPIILCFLGSWILIYLCVFKGVKSGGKVVYFTATFPYLMLIVVL
IRGLTLEGAMTGIKYLLKPDFSKLLQPQVWVDAGSQIFFSYGICFTVMITFGSYNRFHNN
CYRQSVILASSCSLTSLLASFVVFSILGHMSVTQSKNIAEVATQGPGLAFLVYPTGLSLL
PAPRFWSILFFATLLVVGIDTQFASVEGAVSTIVDSWPWLERGKFGREKVTAVLCVIFFL
LGLPLLTNGGLYIFELYNMYAASGISLLSLAFFEAVTIGWIYGVNRYFDNIKEMIGYYPS
AYIKICLRYLIPILSLCILIFFCVMYKPLVLNGYEYPTWANAIGWLMSLASILCVPGFFL
LNLCKGNGTIYERLASALHARSLPVTRIRNLLVYRYTTRLGLAQATAKTQLELSNDIHQY
KYTNEAAAVFCMISDIKPFCYILFWYFRPPFLYFDSGVQ
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtcacaaaccgtcctcgcattgtcaccttgtacttttttgcctttatgtgata
tcatgcattggagggaggttttcaaagcaagacaattattgcaatttttcaaacacaaaa
acaaattttgttggaagcatgaacgctgataaaaaagatgtatgtgaaattgaaatacgt
cctctagcgggacctaaaaaggatgtcagcgagcctgtttcaacttcaaaaaggcagacg
tgggataataaacgtgagtttgttctggcgatgattggttattcggtcggatacggaaac
gtgtggagatttccttatttatgttacaagaacggcggaggagcatttttacttccctat
atcctgtttgtaattattggtggaataccgatgttcttcctggaagtttccctcggtcaa
tttacccagatgagtgcggtggaaatttggcgcttggttccttccatgaagggtattgga
tacggatgcacatttgtcaacctcatcttttgtttttattatgttttggtcatggcctgg
tcgatgctttacttgattcattcgtgtttgccaggacctcttccttggactacgtgcgac
aattggtggaattctggcatctgcgttgctaattctaatacctcggcgacaaatgactcc
gcacccaatattacatcatttaactccacaagtcccgagacggaattttggagaaattac
gtgatacgtcagtcatcaggaatcgatgagattggaagcttggaaaactggcccatcatc
ctctgcttccttggctcctggatcttgatctacctctgcgtctttaaaggtgtgaaatcg
ggaggaaaggttgtctattttacggccacttttccttacttgatgttgatcgtagtcttg
attcgtggtttgacactggagggcgcaatgaccggtattaaatatttactgaaaccagac
ttttctaaacttctccagccgcaggtatgggtcgatgccggcagtcaaatatttttctct
tatggaatctgcttcaccgtcatgataacatttgggagttacaaccggtttcacaacaac
tgctacaggcagtccgtgatcctggcatcgtcgtgcagtctcacgtcattactcgcttca
tttgttgtattcagtatccttggacacatgtcagtaacacagtcaaagaatatcgcggaa
gttgcaactcaaggaccaggtctggccttccttgtttatccaaccggtttgtcgcttttg
cctgctccgagattttggtccattctgttttttgcaactctccttgtggttggcatagac
actcagtttgcaagcgttgaaggcgcagtgtcaaccattgtcgacagctggccgtggtta
gaaagaggaaaatttggccgtgaaaaagtaaccgccgttttgtgcgtcatcttttttctg
cttggattgccgcttcttacaaatggaggcttgtatatctttgaattgtacaacatgtac
gctgccagcggcatttctttgctttccctcgcgtttttcgaagcagtgacaattggttgg
atttatggtgtgaatcgttactttgacaacatcaaagaaatgattggctactacccgtct
gcgtatatcaaaatatgcttgcgatatttgataccaatactatcactgtgcatcttaatt
ttcttctgtgtgatgtacaagccgcttgtactgaatggttatgagtatcctacgtgggcg
aacgctattggttggcttatgtcactagcatcaatcttatgtgtgccaggatttttcctt
cttaatttatgcaaaggaaatggcaccatatatgagagattagcctctgctctgcatgcc
agaagcctacctgtcactcgaataagaaatttactggtttaccggtacactactagacta
ggcctagcgcaagcaacagcgaaaactcagctagagcttagcaatgacattcatcagtac
aaatacaccaacgaagctgctgctgttttctgtatgatcagcgatatcaagcctttttgc
tacatcttattctggtatttcagacctccgtttctttactttgacagtggagtacaataa
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