Clavelina lepadiformis (light-bulb sea squirt): 143450253
Help
Entry
143450253 CDS
T11416
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clep03000
]
143450253
Transcription factors [BR:
clep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
143450253
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
HTH_24
Motif
Other DBs
NCBI-GeneID:
143450253
NCBI-ProteinID:
XP_076806829
LinkDB
All DBs
Position
3:23201155..23204004
Genome browser
AA seq
292 aa
AA seq
DB search
MENLHLHRDSPSPATSSEEGSIVTKQEAGHVKRPMNAFMVWSRGQRRRMAQENPKMHNSE
ISKRLGASWKVLTEFEKRPYIDEAKRLRALHMKEHPDYKYRPRRKPKSLLKQKDRFSFPL
FPSSPTSEPPSMSAHLSLDPIAVEKARAAAAAAFYPTSQSLTTASFPSLNALSLTSQSNA
VSLAAAITQSRLAAAVAARDLSPNTSLYQSSLYSPPHASAPTSGLPSPTSPAAMAAIMNG
SYVLPRSGSWSPSASPTMQSPFAYILVPGATNPYSPIKSGLDYFTPLPLPAM
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccttcatcttcatcgcgactccccaagcccggctacgtcatcggaagagggc
agcattgttacaaaacaggaagctggtcacgttaaacgaccaatgaacgccttcatggtg
tggtcacgtggtcagcgacgacgaatggcgcaagagaacccaaaaatgcacaattctgaa
atttcaaagaggcttggagcttcatggaaagttttgacagaattcgaaaagcgaccttat
attgacgaagccaagcgacttcgtgcccttcacatgaaggaacaccccgattacaaatac
agacctcgacgaaagccaaaatccctcctcaaacaaaaggacagattttcctttccgctc
tttccaagttcaccaaccagcgaacctccttctatgtcagctcatctttcccttgatccc
attgcggttgaaaaagcaagagctgccgcagcggctgctttttatccgacgtcacaatca
ttaacgacggcttcctttccgagcctgaatgccctctctctgacgtcacaatcaaatgca
gtcagccttgccgctgcgatcactcaaagccgattggctgctgcggttgcagcacgtgac
ttgtcgcctaatacgtcactctaccaatcatcactttattccccgccacatgcatcagcg
ccaactagcggtcttccttctcccacttcccctgctgctatggcggccatcatgaacggt
tcctatgtcttacccaggtccggttcctggtccccgagtgccagcccgaccatgcagagc
ccctttgcttacatcctggtaccgggggcaaccaatccctattcccctatcaagagcggt
ttggattacttcacgccccttccactaccggccatgtga
DBGET
integrated database retrieval system
