Clavelina lepadiformis (light-bulb sea squirt): 143450394
Help
Entry
143450394 CDS
T11416
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
143450394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143450394
04121 Ubiquitin system [BR:
clep04121
]
143450394
03036 Chromosome and associated proteins [BR:
clep03036
]
143450394
03400 DNA repair and recombination proteins [BR:
clep03400
]
143450394
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
143450394
Ubiquitin system [BR:
clep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
143450394
Chromosome and associated proteins [BR:
clep03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
143450394
DNA repair and recombination proteins [BR:
clep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
143450394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143450394
NCBI-ProteinID:
XP_076807031
LinkDB
All DBs
Position
3:9812524..9817233
Genome browser
AA seq
543 aa
AA seq
DB search
MSHLPCFSRTRKALGSLTKLLLCCKCDTYMNAPITLAGCNHVFCQNCLKSCDKCPICSVP
FWVQDQKVNRRLSSVSYICSQLRQHINDGGTSFETSNGRNLDALDSGNDLVLQTRQTKCG
IQNSLRKRQFDKENNTRKTIDRKQLKKAKLRHSIDSIPKKTTAKSSSRRSTLSTCFPKDI
EKNSKGETKLHVAAIQGNIDAVSKLLQNPVNLNEKDNAGWTALHEACNRDHTEIVRMLLD
NGAYIDIPGYENETPLMDAVMNNRLNTVRLLLERGANVSLRKLDGRTAFSFAKADEMKSL
LTHYNHACNENSEIDPSVLLTTANNIKISYSSSVDSSKVKRLANLLHAKSSNRHCLGCSH
FLVAHNESLKTARTLKFLQAVASGSWVITENWLDECLKLCCKVSELEFQIKGSYNDHRLG
GPLRSSLAKLKCLPRLFDGCHFFLYGRFSSPSPTKTELSELIKVSGGSVLSREPKPHSDC
VQACQKVPYHAKPDTDQYFFTYYIIYDSSQQQQPRLVRQGKVCAVTVNWLLDCISQFELC
KIV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagccatttaccatgtttttctcggacaagaaaggctttaggctctttgactaaactt
ctgttatgctgcaagtgtgacacttatatgaatgctcctattactttagctggttgcaat
catgttttttgtcaaaattgcttgaaaagctgtgacaaatgcccaatatgttccgtgcca
ttttgggttcaagatcaaaaggtgaatcgtcgacttagttcagtttcatatatttgcagt
caactgcgccaacatataaatgatggcggaacatcatttgaaacctcaaatggacgaaac
ttagatgctttagattcaggcaatgatcttgttttgcaaacacgtcaaacaaagtgtggt
attcaaaactcacttagaaagagacagtttgacaaagaaaacaatacacgaaagaccata
gaccgaaaacaattaaagaaggccaaattaaggcattctatcgattccatcccaaagaaa
accacagcaaagtcttcatcaaggcggtcaacattatcaacatgttttcctaaagatatt
gaaaaaaatagcaagggtgaaactaaattacatgttgctgctattcagggtaatatagat
gcagtttccaagttacttcaaaatcctgttaatcttaatgagaaagacaatgcaggctgg
acggcgctgcatgaagcatgtaaccgtgatcatacagagatagtacgaatgttgctggat
aatggtgcatacatagacataccagggtatgaaaatgaaacgccattaatggatgccgtt
atgaacaatagattaaatactgttcgactattgttagaaagaggagcaaatgtaagtcta
aggaaacttgatggaagaactgccttttcatttgcaaaggcagatgagatgaaaagctta
ctgacacattataatcatgcatgtaatgagaactctgaaatagatccatcagttttatta
actacagcaaacaatatcaaaatttcctactcaagctctgttgattcttcaaaagttaaa
agattggcaaatttattgcatgcaaaatcttctaataggcattgcttggggtgcagtcac
tttttggtggcgcataatgaatctttaaaaacagcaagaactttaaagtttcttcaagca
gttgcaagcggatcttgggtaattacagagaactggttagatgaatgtttaaagctatgc
tgtaaagtgagtgaactagaatttcaaataaagggtagttacaatgaccatcgattggga
ggaccgttaagatcatctttagctaaactaaagtgcttacctcggctgtttgatggttgt
cattttttcttgtatggccgtttttcttctccctctccaacaaaaactgaactttcagaa
ctgataaaggtctctggcggttcagttttgtcaagagaaccgaaaccacatagtgactgt
gttcaagcatgccaaaaagttccataccatgctaaaccagatactgatcaatattttttt
acatactatattatttatgattcttcacaacaacagcagcctcgtttggtacgacagggt
aaggtgtgtgcagttacagtcaactggctcttagattgcatttcccagtttgaattatgt
aaaattgtttaa
DBGET
integrated database retrieval system
