Clavelina lepadiformis (light-bulb sea squirt): 143450416
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Entry
143450416 CDS
T11416
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39-like isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143450416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clep03041
]
143450416
Spliceosome [BR:
clep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
143450416
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Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
2B_soluble
Motif
Other DBs
NCBI-GeneID:
143450416
NCBI-ProteinID:
XP_076807062
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Position
1
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AA seq
518 aa
AA seq
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MTTKFPEKGTKRKVSTEADENIVKKSILGDLEEDYASGDEAYEVDIPKIDRSRSCPYLDT
INRSLLDFDFEKLCSVSLSHLNVYACLVCGKYFQGRGRKSHANTHSVEVNHHVFLNLYTL
KFYCLPDNYQIIDSSLEDITFVLNPTFTKVQIKQIASESKLSRAYDGTTYLPGIVGLNNI
KANDYCNVVLQALSNVPPLRNYFLREENYSHIKRPPGDIMILLSQRFGELIRKLWNPRNF
KAHVSPHEMLQSIVLCSRKRFQITKQGDPLDLLAWFMNSLHVALNGTKKRSSSIVTKTFQ
GEMKVFSRKIPNPEFSDEQKKKLLETEEYQETMVKAPFLYLTLDLPSAPLYKDELEHNII
PQIPLSMLLAKFNGMTEKEYKGKRDSTMKRFEITKLPPYLIFYIKRFTKNLFFTEKNPTI
VNFPVKNIDLEELVAADAKCPNTCYDLMANIVHDGEPNEGKGSYRVHILHQGSNLWYEMQ
DLHVTDILPQMITLSEAYIQIWALRKTANTNDQQQMET
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacgactaaatttcctgaaaagggaactaaacgaaaagtgagcacagaggcggatgaa
aatatcgtgaagaagtcaatattaggtgatcttgaagaagattatgcatctggtgacgaa
gcatatgaagtcgacattccaaaaatagatcgcagccggagttgtccttatctagatacc
atcaataggagtttgttggattttgattttgagaagctttgttcagtatcactttctcat
ttaaatgtttatgcttgtcttgtttgtggaaagtattttcaaggccgtgggagaaagtca
catgcaaatacccattcagttgaagtcaatcatcatgtctttcttaatctttatactttg
aaattttattgcttaccagacaactaccaaatcattgattcttcacttgaagacataaca
tttgtcctgaatcccacattcacaaaagtacaaataaagcaaattgcatcagagtcaaag
ctatccagagcttatgacggtacaacttacttacctggtatcgttggcttgaacaatatc
aaagctaatgattactgcaatgttgttttgcaggctttatccaatgtacctcctttgcga
aattacttcttgcgtgaggagaattactcacacattaaaagaccaccaggcgatattatg
atattgctgtctcaacggtttggagaactcatcaggaagctttggaatcctcggaatttt
aaagcccatgtttcacctcatgagatgttgcaaagcatagttttgtgttcaagaaaaaga
tttcaaatcactaagcagggagatcccctggatttacttgcatggtttatgaattcacta
cacgttgctttaaatggcacaaaaaagcgtagcagcagtatcgttactaaaacatttcaa
ggcgaaatgaaagttttctccaggaaaattcctaatccagagttttcagatgagcagaaa
aagaaactactagagactgaagagtaccaggagacgatggtaaaagcacccttcctctac
ttgacccttgaccttccatcagctccactctacaaagatgaattggagcacaacatcatt
ccccaaatcccactttccatgttactagccaaattcaatggaatgactgaaaaggagtac
aaggggaaacgggattccacaatgaagcgatttgagatcacaaaactgcctccgtacttg
atattttacatcaagcggtttacgaagaatctattttttacagaaaagaatcccactatt
gtgaacttcccagtcaaaaatattgatctcgaggaactagttgctgctgatgccaaatgc
cccaacacttgttatgatctgatggcaaatattgttcatgatggggaacccaatgaagga
aaaggatcttatagagttcacatactccaccagggctcaaacttatggtatgagatgcag
gaccttcacgtaaccgatatccttccacagatgataaccttatcagaggcctacatacaa
atatgggctctgagaaaaacagccaacaccaatgaccaacagcagatggaaacctga
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