Clavelina lepadiformis (light-bulb sea squirt): 143450591
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Entry
143450591 CDS
T11416
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clep03016
]
143450591
Enzymes [BR:
clep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
143450591
Transfer RNA biogenesis [BR:
clep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
143450591
Prokaryotic type
143450591
BRITE hierarchy
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GFIT
Other DBs
NCBI-GeneID:
143450591
NCBI-ProteinID:
XP_076807312
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Position
3:complement(21119731..21123190)
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AA seq
481 aa
AA seq
DB search
MQLVKILSVLLSKPKLSLRKRGFSINKYLCLHRCIFAEANFSTSGFSHQKMDNIPLQNET
EKDEQDKSESKHGLLPGPKRKVALLLAYCGENYFGMAMNRGDRERKTIEGSLIRALVDAK
LVPENCWDHPNKMSYKVASRTDKGVSTCGQVVSLKMVFHENAAELINEKLPHDIRVLGVK
RTTQGFSAQYWAGARTYSYTLPTYAFASSDEEKPQYRISPEKLKSIQSFLYRYKGTHSYH
NFTSGKRMGDMSAHRYIMEFEHETPFLQHDIEFMTLKLKGQSFMIHQIRKMVGLMIAIVG
DHAEEHYFNMAFSEPLVDIPKAPGTGLVLERVHYDTYNKKFSHLHGGIDFSEVESEVEQF
RQTRILPYIYLSEVEEEGMMEWLPTLSCHDFTGERAREDWKKMNEKKNALESNGDVDASA
QEKLDNQDFDANDDFSNTNLKQTHTDLKRKNDQKEDTSFSKIVEPAEKKARNDIIDVNEE
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgttaaaattctttctgtattattatcgaagcctaaattatcattaagaaag
aggggcttctctataaacaaatacctttgcttacatcggtgcatttttgctgaagctaat
ttttcaactagtggttttagtcatcaaaaaatggataacatacctctgcaaaatgaaaca
gaaaaagatgaacaagacaagtctgaatctaagcatggtttattgcctggaccaaaacga
aaggtagcccttttgttggcatattgtggtgaaaattattttggaatggcaatgaacaga
ggagacagagaaagaaaaactattgaaggatcactgatacgtgcgttggttgatgctaaa
cttgttcctgaaaattgttgggatcacccaaataaaatgtcttataaagttgcttctcga
acagataagggagtatctacatgtggacaggttgtatcactgaaaatggtcttccatgaa
aatgccgctgaattaatcaacgaaaaactaccacatgatataagagttcttggggtaaaa
agaacaacacaaggatttagcgcacaatattgggctggtgctcgaacatattcttataca
ctgccaacttatgcctttgccagctcagatgaagaaaaacctcaatacagaatatcacca
gaaaagttaaagagcattcagtcattcctgtatcgttacaaaggaactcattcttatcat
aattttacttctggaaagaggatgggtgatatgagtgcccaccggtatatcatggaattt
gaacatgagaccccatttttgcagcatgacattgagtttatgactttgaaattgaaggga
caaagttttatgatccaccaaataaggaaaatggttggacttatgatagcaatagtgggc
gatcatgctgaagaacattactttaacatggcgttttctgaaccccttgttgacattccc
aaagctcctggaactgggttagtgttggaaagagtccattacgatacttacaacaagaaa
ttcagccatctgcatggtggcattgatttttcagaagtggaaagtgaagtagaacaattc
agacaaacaaggatattgccctatatatatttaagtgaggttgaggaagaaggcatgatg
gagtggcttcctactctctcctgtcatgacttcactggggagcgggcgcgtgaagactgg
aagaaaatgaacgagaaaaagaatgcattggaaagcaacggtgatgtagatgcaagcgct
caggagaaattggataatcaggactttgatgcaaatgatgacttttcgaatactaatttg
aaacagacccacacagacttgaaaagaaaaaatgatcaaaaagaagacacaagcttttca
aaaattgttgaacccgctgagaaaaaagcaagaaacgatattattgatgttaatgaagag
agctag
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