Clavelina lepadiformis (light-bulb sea squirt): 143450801
Help
Entry
143450801 CDS
T11416
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-like isoform X1
KO
K08561
germ cell nuclear factor
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clep03000
]
143450801
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
clep03310
]
143450801
Transcription factors [BR:
clep03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
143450801
Nuclear receptors [BR:
clep03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
143450801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Cast
Motif
Other DBs
NCBI-GeneID:
143450801
NCBI-ProteinID:
XP_076807619
LinkDB
All DBs
Position
3:15802500..15829178
Genome browser
AA seq
703 aa
AA seq
DB search
MSLDLSSHRMEGISGLSLVPHPQRSFLNKMIKPSDEPLMASGFHSSHAYGLHPFMPGSLG
ISPVRSGYGASYGFRPQSNGIPSPKSPIGRSIENQNENEKKDDGKEVKSCLICGDRATGL
HYGIISCEGCKGFFKRSICNKRVYRCTRSKNCVMSRKQRNRCQFCRLLKCLQMGMNRKAI
REDGMPGGRNKSIGPVQISDEEIERILSGKDFEEEAAREEMQRENQHQPEQSNNAYSHLP
TSNTGYLPFLSPTANVRDSTALLTPNSSSPPMMNGLRGIPVSNAVSMGTGSILAGSSSQS
QFMPQFQGVSLRNTPYYPGIAAAAYLPQLNQYQQLSQNQPNIDRSPESGFELSSASLVEQ
LVLAEDTNTLSHIGPEYAPKEQTISKDQLFAILCKVADEMLYRQIVWIKKLPFFDSISIK
DHTTLLSTTWAEIILLAALCVHEDQLFGDLADITTKYLPESEELSRFTDYEMDILERVTY
LYQKFSTLKIDKEEYVIMKVINFLNQDIKGLQEVDKVEEINKRYWYACQRYTEHRAMDRN
AGRHNASPTASGASRFRDLMLCLPDIRYVAGKMLNIDISKLPLLFKAILHTCKLQKAQSM
QLAMAARQPANGISSDPPSPTSSPLTRDRRHPEMREDDKMAAAASMLDLTTHRHSTQNLH
HNAGSVGPPSTSSTASSSGQHPASASPRSSHGRSSRDSAGDSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggatttgagtagtcatcgcatggagggcatcagtggcctctctcttgttcct
catccacagcgatcttttctcaacaagatgataaagccttccgatgaaccgttgatggcg
tccggtttccacagttcgcacgcatatggcctccatccttttatgcctggtagcttaggc
ataagtcctgttcgtagtggctacggtgcctcatacggttttcgtccgcagtccaatggt
attccatctcccaaatcccccatcggcaggtcaattgaaaatcaaaatgaaaatgaaaag
aaagatgacgggaaggaggtgaagagttgtttaatatgtggcgatcgtgctaccggctta
cactatggcatcatatcatgcgaaggttgcaagggcttctttaaacgaagtatatgcaac
aaacgggtctaccggtgcacccgaagcaaaaactgcgttatgtcaagaaaacagagaaat
cgttgccagttttgccgtttgctcaaatgtttgcaaatgggcatgaaccggaaagcgatc
agggaagacggcatgccgggtggaagaaacaaaagcatcgggccagtgcagatttccgat
gaggagattgagcgcattttgtctggcaaagactttgaggaagaagcagcccgggaggaa
atgcaacgcgaaaatcagcatcaacccgaacaatcgaacaatgcctactctcatcttccc
acctccaacaccgggtatcttccttttctttcgccaactgcaaacgtgagggattcgacg
gctttgctcactccaaactccagctcaccgcctatgatgaatggacttcgtggtatcccg
gtctccaatgcggtgtcgatgggtaccggttccatccttgccggttccagctcccagtcg
cagttcatgccacagtttcaaggcgtttccctcaggaacacaccatattacccaggaata
gcagcagctgcttatctacctcaattgaaccagtaccagcaattgtcacaaaatcagcca
aacatcgaccgttcgccagaatcaggtttcgaactaagcagtgcatctttagtggaacaa
ctcgtcctcgctgaagatacgaacacattgtctcacattggaccagaatatgcaccaaag
gaacaaactatatcgaaggaccaactcttcgcaatcctatgcaaagttgctgatgaaatg
ttgtaccgtcagatagtctggatcaaaaagttgccattttttgacagcatctcaataaaa
gatcatacaacccttctgagtacaacttgggctgaaattatattgcttgctgcgctctgt
gttcatgaagatcaactctttggcgaccttgccgatatcacgaccaagtatctaccagag
agcgaagagctgtccagatttacagattacgaaatggacatattggagcgcgttacatat
ttatatcaaaaattttcaacgttgaaaattgacaaggaggaatacgtgattatgaaagtg
atcaactttctgaatcaagacatcaaaggcctgcaggaggttgataaagtggaagagatc
aacaagcgctactggtatgcttgccaacgctacactgagcatcgagcgatggatcgcaat
gccggccgtcataacgcgtcgcccaccgcgtccggcgcttcccgttttcgcgaccttatg
ctctgcttacccgatatacgttatgttgctgggaaaatgctcaatatagatatatcaaaa
cttccgctgttgtttaaggcgattttgcacacatgcaagcttcagaaggcgcaatccatg
caacttgcaatggctgccagacaaccagcaaatgggatcagttcagacccaccttcaccc
acttcgtccccgctgacccgagatcggcgtcaccctgaaatgagggaagacgacaaaatg
gcggccgctgcgtcgatgctcgatctgacaactcatagacattcaacccagaatctacat
cataacgccgggtcggtcggtccgccgtcgacttcctcaacagcatcatctagtggacag
catccggcttctgcgtcgccccgatcgagtcatggaaggagtagtagggacagcgccggt
gattcgtcgtga
DBGET
integrated database retrieval system
